RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CCDC77Q9BR77 488 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 DHRS4Q9BTZ2 278 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 ROPN1BQ9BZX4 212 aaPredicted RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 SLC6A17Q9H1V8 727 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 TRABDQ9H4I3 376 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 SUDS3Q9H7L9 328 aaPredicted RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 ROPN1Q9HAT0 212 aaPredicted RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 ZFYVE1Q9HBF4 777 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 TMBIM4Q9HC24 238 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 CD248Q9HCU0 757 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 BPIFA1Q9NP55 256 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 PPANQ9NQ55 473 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 IARS2Q9NSE4 1012 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 NLE1Q9NVX2 485 aaPredicted RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 EURLQ9NYK6 297 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 VPS18Q9P253 973 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 ITM2BQ9Y287 266 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 MTF2Q9Y483 593 aaPredicted RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 ZNF106Q9H2Y7 1883 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 CCDC162PA2VCL2 907 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 H3BQF6 201 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 MID1O15344 667 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 STX7O15400 261 aaKnown RBP11.31□□□□□ -0.6
VMP1-207ENST00000588131 GOT2P00505 430 aaKnown RBP11.31□□□□□ -0.6
VMP1-207ENST00000588131 IVLP07476 585 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 CHRNB1P11230 501 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 PAMP19021 973 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 XPAP23025 273 aaPredicted RBP11.31□□□□□ -0.6
VMP1-207ENST00000588131 VIPR1P32241 457 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 NUBP1P53384 320 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 RPS14P62263 151 aaKnown RBP11.31□□□□□ -0.6
VMP1-207ENST00000588131 STARD3Q14849 445 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 CST6Q15828 149 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 SKIDA1Q1XH10 827 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 TTMPQ5BVD1 217 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 TEDDM1Q5T9Z0 273 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 PDPK2PQ6A1A2 396 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 ZNF449Q6P9G9 518 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 TTC7BQ86TV6 843 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 OR2T3Q8NH03 318 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 SLC44A1Q8WWI5 657 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 ATXN2LQ8WWM7 1075 aaKnown RBP11.31□□□□□ -0.6
VMP1-207ENST00000588131 PEX13Q92968 403 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 HDAC10Q969S8 669 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 CDKN2AIPNLQ96HQ2 116 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 ASB2Q96Q27 587 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 SRPK1Q96SB4 655 aaKnown RBP11.31□□□□□ -0.6
VMP1-207ENST00000588131 CD320Q9NPF0 282 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 IL17CQ9P0M4 197 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 MARCH4Q9P2E8 410 aaPredicted RBP11.31□□□□□ -0.6
VMP1-207ENST00000588131 WNT16Q9UBV4 365 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 FETUBQ9UGM5 382 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 SLC24A2Q9UI40 661 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 FKBPLQ9UIM3 349 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 PSAT1Q9Y617 370 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 ATG2BQ96BY7 2078 aa11.31□□□□□ -0.6
VMP1-207ENST00000588131 UNC80Q8N2C7 3258 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 FOXO6A8MYZ6 492 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 SLC7A4O43246 635 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 OPA1O60313 960 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PRSS56P0CW18 603 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 CYP2A6P11509 494 aaPredicted RBP11.3□□□□□ -0.6
VMP1-207ENST00000588131 ADRB3P13945 408 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 DRD3P35462 400 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 HMGCLP35914 325 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 MMP12P39900 470 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 MSH2P43246 934 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 NEK3P51956 506 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 STARD6P59095 220 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PRAMEP78395 509 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PDE1BQ01064 536 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PTSQ03393 145 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 CNTN1Q12860 1018 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PEX6Q13608 980 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 SEMA3AQ14563 771 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 TMED2Q15363 201 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 EOGTQ5NDL2 527 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 FAM46CQ5VWP2 391 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 ZNF776Q68DI1 518 aaPredicted RBP11.3□□□□□ -0.6
VMP1-207ENST00000588131 ADGRD1Q6QNK2 874 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 TMEM92Q6UXU6 159 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 RFLNAQ6ZTI6 216 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 ERN2Q76MJ5 926 aaKnown RBP11.3□□□□□ -0.6
VMP1-207ENST00000588131 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PTAR1Q7Z6K3 402 aaPredicted RBP11.3□□□□□ -0.6
VMP1-207ENST00000588131 LRRC6Q86X45 466 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 TDRPQ86YL5 185 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 DENND6AQ8IWF6 608 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 CNTN4Q8IWV2 1026 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 SIX5Q8N196 739 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 AADATQ8N5Z0 425 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PNPLA1Q8N8W4 532 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 OR6P1Q8NGX9 317 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 CDKL2Q92772 493 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PPP1R16AQ96I34 528 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 FOXQ1Q9C009 403 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms