RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 TPI1P60174 286 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 SARNPP82979 210 aaKnown RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 ECT2LQ008S8 904 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CFHR1Q03591 330 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CNTN1Q12860 1018 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 NME3Q13232 169 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 PDK1Q15118 436 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 E2F5Q15329 346 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 SLC45A4Q5BKX6 768 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 MPP7Q5T2T1 576 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 NUGGCQ68CJ6 796 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 NAPEPLDQ6IQ20 393 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CRTC1Q6UUV9 634 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 GPR155Q7Z3F1 870 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CHSY1Q86X52 802 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 FAM131BQ86XD5 332 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 UNC45BQ8IWX7 931 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 RIBC1Q8N443 379 aaPredicted RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 PLD5Q8N7P1 536 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 TSEN2Q8NCE0 465 aaKnown RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 SNIP1Q8TAD8 396 aaKnown RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 FAM76AQ8TAV0 307 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 FRS2Q8WU20 508 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 FGF11Q92914 225 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 SLC39A13Q96H72 371 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 ZIM3Q96PE6 472 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 PPP1R2P1Q96PQ5 205 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 QKIQ96PU8 341 aaKnown RBP eCLIP7.91□□□□□ -1.14
VMP1-204ENST00000587259 CSPG4P5Q96PW8 444 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 HAPLN3Q96S86 360 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 TMEM121Q9BTD3 319 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 TMEM109Q9BVC6 243 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 NRSN2Q9GZP1 204 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 WDCPQ9H6R7 721 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CATSPERBQ9H7T0 1116 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 FZD4Q9ULV1 537 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CLCA2Q9UQC9 943 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 NYNRINQ9P2P1 1898 aaKnown RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 A0A1B0GVM2 712 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 A0A1W2PNU3 283 aaPredicted RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 IRAK2O43187 625 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 LATO43561 262 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 NEBLO76041 1014 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 ADH1BP00325 375 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 IGLV3-25P01717 112 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 ASLP04424 464 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 CTSLP07711 333 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 C5AR1P21730 350 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 DGKAP23743 735 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 IVDP26440 423 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 RXRGP48443 463 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 ARL4CP56559 192 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 TAS2R38P59533 333 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 CBX1P83916 185 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 DAB2P98082 770 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 CDK16Q00536 496 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 NRG1Q02297 640 aaPredicted RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 CBLBQ13191 982 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 PAFAH1B3Q15102 231 aaKnown RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 LLGL1Q15334 1064 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 HIF1AQ16665 826 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D25Q3MII6 688 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 ACCSLQ4AC99 568 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 TAF1BQ53T94 588 aaPredicted RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 CEP85LQ5SZL2 805 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 AGBL2Q5U5Z8 902 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 AGBL4Q5VU57 503 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 RNF219Q5W0B1 726 aaPredicted RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 RFX8Q6ZV50 586 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 Q6ZVU0 165 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 PDIK1LQ8N165 341 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 LZTR1Q8N653 840 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 CCDC185Q8N715 623 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 DCBLD1Q8N8Z6 715 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 OR13H1Q8NG92 308 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 PCDH19Q8TAB3 1148 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 TFB1MQ8WVM0 346 aaKnown RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 RNF34Q969K3 372 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 VAT1Q99536 393 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 LGMNQ99538 433 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 RETREG1Q9H6L5 497 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 PIGVQ9NUD9 493 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 PSD3Q9NYI0 1048 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 CWC15Q9P013 229 aaKnown RBP7.9□□□□□ -1.14
VMP1-204ENST00000587259 VPS18Q9P253 973 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 SLC12A6Q9UHW9 1150 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 SCML1Q9UN30 329 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 HEY1Q9Y5J3 304 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 SNX10Q9Y5X0 201 aa7.9□□□□□ -1.14
VMP1-204ENST00000587259 A0A087WUV0 522 aaPredicted RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 LY6G6EA0A0G2JKS1 128 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 C5orf60A6NFR6 353 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 E9PAM4 449 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 H3BQF6 201 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 K7ERQ8 282 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 AGPSO00116 658 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 AP3B1O00203 1094 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 KCNN4O15554 427 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms