RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TMEM9Q9P0T7 183 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 TAAR2Q9P1P5 351 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 PLEKHM1Q9Y4G2 1056 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 PCDHGA3Q9Y5H0 932 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 B3GALT1Q9Y5Z6 326 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 ARHGEF17Q96PE2 2063 aaPredicted RBP11.9□□□□□ -0.51
BRCA1-225ENST00000586385 FLNCQ14315 2725 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 STMND1H3BQB6 276 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 HGSO14964 777 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-225ENST00000586385 PPM1DO15297 605 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 TEX33O43247 280 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 CALB1P05937 261 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 MYCLP1P12525 358 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-225ENST00000586385 LHCGRP22888 699 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 KELP23276 732 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
BRCA1-225ENST00000586385 SERPINA4P29622 427 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 UGT1A3P35503 534 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 POLD2P49005 469 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 LIMK2P53671 638 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 AIF1P55008 147 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 TPI1P60174 286 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 KRT31Q15323 416 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 SKIDA1Q1XH10 827 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 CFAP58Q5T655 872 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 CDKAL1Q5VV42 579 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 CLEC18BQ6UXF7 455 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 HSD11B1LQ7Z5J1 315 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 HEATR4Q86WZ0 1026 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 ZNF564Q8TBZ8 553 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-225ENST00000586385 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 ZDHHC1Q8WTX9 485 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 KCTD15Q96SI1 283 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-225ENST00000586385 TEX101Q9BY14 249 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 SPRY4Q9C004 299 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 CARS2Q9HA77 564 aaKnown RBP11.89□□□□□ -0.51
BRCA1-225ENST00000586385 MOSPD1Q9UJG1 213 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 PCDHB11Q9Y5F2 797 aa11.89□□□□□ -0.51
BRCA1-225ENST00000586385 IGHV1OR21-1A0A087WYE8 117 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 A0A0U1RQS6 177 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 HTRA2O43464 458 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-225ENST00000586385 PALMO75781 387 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
BRCA1-225ENST00000586385 PEX11BO96011 259 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 SOD1P00441 154 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 THRAP10827 490 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 CR2P20023 1033 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 TNFAIP3P21580 790 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 MPSTP25325 297 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 POLE2P56282 527 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 CTBSQ01459 385 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 BCL2L1Q07817 233 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 NSUN2Q08J23 767 aaKnown RBP eCLIP11.88□□□□□ -0.51
BRCA1-225ENST00000586385 SQSTM1Q13501 440 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 ACOX1Q15067 660 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 DNAJC24Q6P3W2 148 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 SLC30A9Q6PML9 568 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 RFLNAQ6ZTI6 216 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 LURAP1LQ8IV03 231 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 PGBD5Q8N414 524 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 BMPERQ8N8U9 685 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 ART4Q93070 314 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 TAAR9Q96RI9 348 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 SYT11Q9BT88 431 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 CDH19Q9H159 772 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 ADNPQ9H2P0 1102 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 TRNAU1APQ9NX07 287 aaKnown RBP11.88□□□□□ -0.51
BRCA1-225ENST00000586385 OCIAD1Q9NX40 245 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 ANKMY1Q9P2S6 941 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 SUFUQ9UMX1 484 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 AP4E1Q9UPM8 1137 aa11.88□□□□□ -0.51
BRCA1-225ENST00000586385 NBASA2RRP1 2371 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 RELNP78509 3460 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 ARHGAP42A6NI28 874 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 RHPN2P1A8MT19 583 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 EEF2KO00418 725 aaKnown RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 DUX1O43812 170 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 ERCC2P18074 760 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 HTR7P34969 479 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 ETV3P41162 512 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 GPR3P46089 330 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 GNPDA1P46926 289 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 SCNN1BP51168 640 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 CDK3Q00526 305 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 SLC10A7Q0GE19 358 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 KCNAB2Q13303 367 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 IGFBP7Q16270 282 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 CLPPQ16740 277 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 TSR1Q2NL82 804 aaKnown RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 TMEM164Q5U3C3 297 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 BORAQ6PGQ7 559 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 RFX8Q6ZV50 586 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 TSPAN33Q86UF1 283 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 MCOLN2Q8IZK6 566 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 OR4D9Q8NGE8 314 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms