RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TEX33O43247 280 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 FGF3P11487 239 aaPredicted RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 MYCLP1P12525 358 aaPredicted RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 ALDH4A1P30038 563 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 RENBPP51606 427 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 ARSDP51689 593 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 MAPK10P53779 464 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 AP1S1P61966 158 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 CYP4F2P78329 520 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 SLC10A7Q0GE19 358 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 ACOX1Q15067 660 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 PHF19Q5T6S3 580 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 PLEKHA7Q6IQ23 1121 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 CYP4V2Q6ZWL3 525 aaPredicted RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 VASH2Q86V25 355 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 TP53INP2Q8IXH6 220 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 NPWQ8N729 165 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 ZSCAN1Q8NBB4 408 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 KIAA1524Q8TCG1 905 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 HTR3CQ8WXA8 447 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 PEBP4Q96S96 227 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 KCTD15Q96SI1 283 aaPredicted RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 CINPQ9BW66 212 aaPredicted RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 FRMD8Q9BZ67 464 aaPredicted RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 DHX35Q9H5Z1 703 aaKnown RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 SEPT11Q9NVA2 429 aaKnown RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 PARVAQ9NVD7 372 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 TRNAU1APQ9NX07 287 aaKnown RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 KCTD5Q9NXV2 234 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 B4GALT6Q9UBX8 382 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 PCSK1NQ9UHG2 260 aa14.48□□□□□ -0.09
SDF2-202ENST00000585428 HEMK1Q9Y5R4 338 aaPredicted RBP14.48□□□□□ -0.09
SDF2-202ENST00000585428 IGHV5-10-1A0A0J9YXX1 117 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 TTC24A2A3L6 582 aaPredicted RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 LGALS16A8MUM7 142 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 HGSO14964 777 aaPredicted RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 DAPK3O43293 454 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 ECEL1O95672 775 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 PEX11BO96011 259 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 CR2P20023 1033 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 GPR3P46089 330 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 MAZP56270 477 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 UBXN1Q04323 297 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 AMZ1Q400G9 498 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 TMEM164Q5U3C3 297 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 ATG14Q6ZNE5 492 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 APTXQ7Z2E3 356 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 PSTKQ8IV42 348 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 ZDHHC1Q8WTX9 485 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 PTCD2Q8WV60 388 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 NKD1Q969G9 470 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 SCARF2Q96GP6 870 aaPredicted RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 PCMTD1Q96MG8 357 aaPredicted RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 ZNF599Q96NL3 588 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 TAAR9Q96RI9 348 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 NUDT22Q9BRQ3 303 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 SNRNP25Q9BV90 132 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 SLC12A9Q9BXP2 914 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 CARS2Q9HA77 564 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 GEMIN8Q9NWZ8 242 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 CWC15Q9P013 229 aaKnown RBP14.47□□□□□ -0.09
SDF2-202ENST00000585428 TAAR2Q9P1P5 351 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 MOSPD1Q9UJG1 213 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 PCDHGC4Q9Y5F7 938 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 PCDHGA3Q9Y5H0 932 aa14.47□□□□□ -0.09
SDF2-202ENST00000585428 MYO18BQ8IUG5 2567 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 A0A1W2PQ67 120 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 RHPN2P1A8MT19 583 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 DFFAO00273 331 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 PPM1DO15297 605 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 HEXIM1O94992 359 aaKnown RBP14.46□□□□□ -0.09
SDF2-202ENST00000585428 DESP17661 470 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 PSMA2P25787 234 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 AK4P27144 223 aaPredicted RBP14.46□□□□□ -0.09
SDF2-202ENST00000585428 TEAD1P28347 426 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 LIMK2P53671 638 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 NFKB2Q00653 900 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 DPYSQ14117 519 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 LBRQ14739 615 aaKnown RBP14.46□□□□□ -0.09
SDF2-202ENST00000585428 CLCA4Q14CN2 919 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 CNGA3Q16281 694 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.09
SDF2-202ENST00000585428 NAGSQ8N159 534 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 LZTR1Q8N653 840 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 RCBTB1Q8NDN9 531 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 NUS1Q96E22 293 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 FUCA2Q9BTY2 467 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 GSDMCQ9BYG8 508 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 SP110Q9HB58 689 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 PHPT1Q9NRX4 125 aaPredicted RBP14.46□□□□□ -0.09
SDF2-202ENST00000585428 AKAP7Q9P0M2 348 aaPredicted RBP14.46□□□□□ -0.09
SDF2-202ENST00000585428 SEPT3Q9UH03 358 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 SLC17A4Q9Y2C5 497 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 PPIL1Q9Y3C6 166 aa14.46□□□□□ -0.09
SDF2-202ENST00000585428 LRRK1Q38SD2 2015 aa14.46□□□□□ -0.1
SDF2-202ENST00000585428 LRP4O75096 1905 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 STMND1H3BQB6 276 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 ZW10O43264 779 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 SOCS5O75159 536 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms