RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 H3BNH8 94 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 J3KR12 359 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 POMCP01189 267 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PCSK6P29122 969 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NDST2P52849 883 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SH3BP2P78314 561 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ITKQ08881 620 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 LRRC23Q53EV4 343 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PPP4R4Q6NUP7 873 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PIM3Q86V86 326 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NUP93Q8N1F7 819 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DRAXINQ8NBI3 349 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SH3RF2Q8TEC5 729 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CANT1Q8WVQ1 401 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PPWD1Q96BP3 646 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PTERQ96BW5 349 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SERPINB11Q96P15 392 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CCT7Q99832 543 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ANKRD60Q9BZ19 345 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 AKTIPQ9H8T0 292 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PNPLA3Q9NST1 481 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 POLR3BQ9NW08 1133 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MARCH4Q9P2E8 410 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PHF24Q9UPV7 400 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DNAJC15Q9Y5T4 150 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CCL22O00626 93 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HTRA2O43464 458 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 STAMBPO95630 424 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CHRNA1P02708 482 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FGF4P08620 206 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GRIK1P39086 918 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 USP46P62068 366 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PRAMEP78395 509 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DSC2Q02487 901 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CCL14Q16627 93 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NHSL2Q5HYW2 709 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ZBTB49Q6ZSB9 765 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RSPH1Q8WYR4 309 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ZUFSPQ96AP4 578 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HMCESQ96FZ2 354 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 KLHL5Q96PQ7 755 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ASB2Q96Q27 587 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RGS18Q9NS28 235 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DUS2Q9NX74 493 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HSFX1Q9UBD0 423 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ABCD2Q9UBJ2 740 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MYRFQ9Y2G1 1151 aa14.21□□□□□ -0.13
CDK5RAP3-237ENST00000585163 A0A0J9YYE9 177 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ZNF839A8K0R7 811 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TNPO2O14787 897 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TIPRLO75663 272 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CTSHP09668 335 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 HAPLN1P10915 354 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CD1DP15813 335 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CKMT2P17540 419 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 GRIA3P42263 894 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ALDH3B2P48448 385 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CDH13P55290 713 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TSPY1Q01534 308 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MAP7D1Q3KQU3 841 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PITRM1Q5JRX3 1037 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SIRPB2Q5JXA9 342 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 KRT80Q6KB66 452 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ERMP1Q7Z2K6 904 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TFAP2DQ7Z6R9 452 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SPATA2LQ8IUW3 424 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ZNF683Q8IZ20 524 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 THEM5Q8N1Q8 247 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TRIML2Q8N7C3 387 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 OR52K2Q8NGK3 314 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 HOPXQ9BPY8 73 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 AGO3Q9H9G7 860 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TIMMDC1Q9NPL8 285 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MAP10Q9P2G4 905 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 GMPR2Q9P2T1 348 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CRYL1Q9Y2S2 319 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 A0A1W2PQH9 124 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 OR51F1A6NGY5 319 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 LDB2O43679 373 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TRMUO75648 421 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CDK14O94921 469 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ATP6V1B2P21281 511 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 FDXRP22570 491 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PRKCQQ04759 706 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 FAM81AQ8TBF8 368 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TADA1Q96BN2 335 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PABPC5Q96DU9 382 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ZNF512Q96ME7 567 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PRDM5Q9NQX1 630 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CCM2LQ9NUG4 571 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TLR6Q9Y2C9 796 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 NDUFAF1Q9Y375 327 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SQORQ9Y6N5 450 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TTC3P53804 2025 aa14.2□□□□□ -0.14
CDK5RAP3-237ENST00000585163 NME4O00746 187 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SOCS2O14508 198 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 AKAP10O43572 662 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ZNF623O75123 536 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 RHOQP17081 205 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TUBA4AP68366 448 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms