RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 MAPK10P53779 464 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 HADHBP55084 474 aaKnown RBP10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 ZFP36L1Q07352 338 aaKnown RBP10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 PTP4A2Q12974 167 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 BIRC2Q13490 618 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 PEX6Q13608 980 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 CLPPQ16740 277 aaPredicted RBP10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 CLEC16AQ2KHT3 1053 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 C15orf59Q2T9L4 293 aaPredicted RBP10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 CERCAMQ5T4B2 595 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 PHF19Q5T6S3 580 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 OGFOD3Q6PK18 319 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 OR56A4Q8NGH8 313 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 TUBGCP5Q96RT8 1024 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 DPEP2Q9H4A9 486 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 PCDH12Q9NPG4 1184 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 LRIT1Q9P2V4 623 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 UBA2Q9UBT2 640 aaPredicted RBP10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 RABGEF1Q9UJ41 708 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 OR1A2Q9Y585 309 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 DUSP10Q9Y6W6 482 aa10.79□□□□□ -0.68
CSNK1D-226ENST00000585026 NAV2Q8IVL1 2488 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 PRAMEF33A0A0G2JMD5 474 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 TSPAN11A1L157 253 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 RASA4BC9J798 803 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 FAM72CH0Y354 149 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 RASA4O43374 803 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 SUV39H1O43463 412 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 NUDT21O43809 227 aaKnown RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 PRAMEF10O60809 474 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 PCCBP05166 539 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 HOXC4P09017 264 aaPredicted RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 ITIH2P19823 946 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 SERPINA4P29622 427 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 LIG3P49916 1009 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 GSCP56915 257 aaPredicted RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 KIAA1024LP59773 190 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 GNG11P61952 73 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 POLR2LP62875 67 aaKnown RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 SERINC3Q13530 473 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 TCEA2Q15560 299 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 MAP9Q49MG5 647 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 C14orf28Q4W4Y0 310 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 FAM72AQ5TYM5 149 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 FAM72DQ6L9T8 149 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 SPRED1Q7Z699 444 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 PIM3Q86V86 326 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 FAM72BQ86X60 149 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 PHF13Q86YI8 300 aaPredicted RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 TRIM58Q8NG06 486 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 FAM172AQ8WUF8 416 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 CENPIQ92674 756 aaPredicted RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 USP7Q93009 1102 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 SELENOOQ9BVL4 669 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 TRIM4Q9C037 500 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 ADNPQ9H2P0 1102 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 GEMIN8Q9NWZ8 242 aaKnown RBP10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 KCTD5Q9NXV2 234 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 TAS2R14Q9NYV8 317 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 GUCA1BQ9UMX6 200 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 ATP8A1Q9Y2Q0 1164 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 COQ6Q9Y2Z9 468 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 RNF215Q9Y6U7 377 aa10.78□□□□□ -0.68
CSNK1D-226ENST00000585026 FAM170AA1A519 330 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 RHPN2P1A8MT19 583 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 WASH4PA8MWX3 477 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 STMND1H3BQB6 276 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 HGSO14964 777 aaPredicted RBP10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 CASC3O15234 703 aaKnown RBP10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 FGF10O15520 208 aaPredicted RBP10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 CREB3O43889 395 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 MTA2O94776 668 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 PIGNO95427 931 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 CPNE6O95741 557 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 CYP1A2P05177 515 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 CALB1P05937 261 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 FAM87AP0C7U9 286 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 MYBL1P10243 752 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 KRT10P13645 584 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 ITIH1P19827 911 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 GPD1P21695 349 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 NFKBIAP25963 317 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 HTR7P34969 479 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 NSFP46459 744 aaKnown RBP10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 CSNK1DP48730 415 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 AIF1P55008 147 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 HDAC4P56524 1084 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 TUBB2AQ13885 445 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 TBR1Q16650 682 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 IFI16Q16666 785 aaKnown RBP10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 ZNF569Q5MCW4 686 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 SCYL2Q6P3W7 929 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 SYT10Q6XYQ8 523 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 ZFAND4Q86XD8 727 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 DTX1Q86Y01 620 aa10.77□□□□□ -0.69
CSNK1D-226ENST00000585026 RHOT2Q8IXI1 618 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms