RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CREB1P16220 341 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 MMP8P22894 467 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 PIK3CAP42336 1068 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 PDE6CP51160 858 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF81P51508 661 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 JAK3P52333 1124 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 UBXN1Q04323 297 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 FOXF2Q12947 444 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CDC16Q13042 620 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 MTA1Q13330 715 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 BOP1Q14137 746 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 GIT2Q14161 759 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 NPY5RQ15761 445 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 FCRLBQ6BAA4 426 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 KRT80Q6KB66 452 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CYP20A1Q6UW02 462 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 VSTM1Q6UX27 236 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 STXBP4Q6ZWJ1 553 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF627Q7L945 461 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ASCL5Q7RTU5 278 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CNPY4Q8N129 248 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 LNX2Q8N448 690 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 AVL9Q8NBF6 648 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ERMNQ8TAM6 284 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ZCCHC10Q8TBK6 192 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 PHOSPHO2Q8TCD6 241 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 MGARPQ8TDB4 240 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ADAMTS15Q8TE58 950 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CNOT9Q92600 299 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 MAP4K1Q92918 833 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 FERMT1Q9BQL6 677 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 PTDSS2Q9BVG9 487 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CUEDC2Q9H467 287 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 DBNDD1Q9H9R9 158 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 C17orf75Q9HAS0 396 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 MCM9Q9NXL9 1143 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 HOOK1Q9UJC3 728 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 MOSPD1Q9UJG1 213 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ODF2LQ9ULJ1 636 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TNNQ9UQP3 1299 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 DNAJC16Q9Y2G8 782 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ATG2AQ2TAZ0 1938 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TSC2P49815 1807 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CDK5RAP2Q96SN8 1893 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 DRGXA6NNA5 263 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 KBTBD13C9JR72 458 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 MAGEB2O15479 319 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 DOK2O60496 412 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ALDOAP04075 364 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CYP3A4P08684 503 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CSH1P0DML2 217 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CSH2P0DML3 217 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 UBL4AP11441 157 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 COX7A2P14406 83 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 FGFR4P22455 802 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ABCD3P28288 659 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TKTP29401 623 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CCND2P30279 289 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CHN2P52757 468 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 DCAF7P61962 342 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TUBB3Q13509 450 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIM71Q2Q1W2 868 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 DPCR1Q3MIW9 517 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 LRRC24Q50LG9 513 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 WDR93Q6P2C0 686 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC73Q6ZRK6 1079 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 PIK3AP1Q6ZUJ8 805 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 METTL6Q8TCB7 284 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 OPTNQ96CV9 577 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 RMDN1Q96DB5 314 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ZFYVE19Q96K21 471 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 C5orf34Q96MH7 638 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 JAKMIP1Q96N16 626 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 RAB3IPQ96QF0 476 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 OSBPL9Q96SU4 736 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 REEP2Q9BRK0 252 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ADPGKQ9BRR6 497 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 IFT27Q9BW83 186 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TEX12Q9BXU0 123 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 AGXT2Q9BYV1 514 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 IFIH1Q9BYX4 1025 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 UPF3BQ9BZI7 483 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIM31Q9BZY9 425 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 PDE11AQ9HCR9 933 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 HCFC1R1Q9NWW0 138 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 TUBA8Q9NY65 449 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 ITM2BQ9Y287 266 aa1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 DRG1Q9Y295 367 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM237BA0A1B0GVD1 139 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 DNM1LO00429 736 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 DUSP11O75319 330 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 DEXIO95424 95 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 BAG2O95816 211 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 HSPD1P10809 573 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MCM3P25205 808 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 AXLP30530 894 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 GYG1P46976 350 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC25A3Q00325 362 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 STK4Q13043 487 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MYBPC2Q14324 1141 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms