RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 FANCCQ00597 558 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 RFTN1Q14699 578 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-206ENST00000584112 CA9Q16790 459 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 TMEM52BQ4KMG9 183 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ZNF542PQ5EBM4 170 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 LRRC73Q5JTD7 316 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 MANEAQ5SRI9 462 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ZCCHC8Q6NZY4 707 aaKnown RBP11.2□□□□□ -0.62
CCDC47-206ENST00000584112 HEATR4Q86WZ0 1026 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 MCEMP1Q8IX19 187 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 LZTR1Q8N653 840 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ARFGAP1Q8N6T3 406 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 PAF1Q8N7H5 531 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ZSCAN1Q8NBB4 408 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ZNF548Q8NEK5 533 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-206ENST00000584112 SYN2Q92777 582 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-206ENST00000584112 CENPTQ96BT3 561 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 TCTN2Q96GX1 697 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 APOLD1Q96LR9 279 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 TBATAQ96M53 351 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-206ENST00000584112 SLC39A8Q9C0K1 460 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ATP13A3Q9H7F0 1226 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ZWILCHQ9H900 591 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 SPASTQ9UBP0 616 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 CSPG4Q6UVK1 2322 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 K7ESM1 405 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 DFFAO00273 331 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 CASC3O15234 703 aaKnown RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 INSIG1O15503 277 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 AQP9O43315 295 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 JUNDP17535 347 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 TGM2P21980 687 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 IGFALSP35858 605 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 ARL4AP40617 200 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 BLKP51451 505 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 RENBPP51606 427 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 UBASH3AP57075 661 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 IL10RBQ08334 325 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 NSUN2Q08J23 767 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 PIGHQ14442 188 aaPredicted RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 TESK1Q15569 626 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 UGP2Q16851 508 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 ZXDCQ2QGD7 858 aaPredicted RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 BOLA3Q53S33 107 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 AFMIDQ63HM1 303 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 MACC1Q6ZN28 852 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 CYP4V2Q6ZWL3 525 aaPredicted RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 SRLQ86TD4 932 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 JAMLQ86YT9 394 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 ARHGAP12Q8IWW6 846 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 TP53I13Q8NBR0 393 aaPredicted RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 GALNT11Q8NCW6 608 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 GLMNQ92990 594 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 ZNF599Q96NL3 588 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 IL12RB2Q99665 862 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 MDFIQ99750 246 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 WRAP53Q9BUR4 548 aaKnown RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 SLC13A1Q9BZW2 595 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 TRIM7Q9C029 511 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 ABCG4Q9H172 646 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 CBX8Q9HC52 389 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 PCDH12Q9NPG4 1184 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 CWC15Q9P013 229 aaKnown RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 APOBEC3BQ9UH17 382 aaKnown RBP11.19□□□□□ -0.62
CCDC47-206ENST00000584112 TUBD1Q9UJT1 453 aa11.19□□□□□ -0.62
CCDC47-206ENST00000584112 SCN8AQ9UQD0 1980 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 TMEM110-MUSTN1A8MSY1 372 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 TPP1O14773 563 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 HNRNPRO43390 633 aaKnown RBP11.18□□□□□ -0.62
CCDC47-206ENST00000584112 NEBLO76041 1014 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 LDLRP01130 860 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 SERPING1P05155 500 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 ITGA2BP08514 1039 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 NR1D1P20393 614 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 HSPA9P38646 679 aaKnown RBP11.18□□□□□ -0.62
CCDC47-206ENST00000584112 EIF4A3P38919 411 aaKnown RBP11.18□□□□□ -0.62
CCDC47-206ENST00000584112 MMP12P39900 470 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 PBX1P40424 430 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 PEX5P50542 639 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 POLR2LP62875 67 aaKnown RBP11.18□□□□□ -0.62
CCDC47-206ENST00000584112 ZBED6P86452 979 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 BCL2L1Q07817 233 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 EIF2B5Q13144 721 aaKnown RBP11.18□□□□□ -0.62
CCDC47-206ENST00000584112 DPYSQ14117 519 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 LRRC14Q15048 493 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 AGERQ15109 404 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 IRF4Q15306 451 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 DPYSL2Q16555 572 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 EIF2S3LQ2VIR3 472 aaKnown RBP11.18□□□□□ -0.62
CCDC47-206ENST00000584112 HGSNATQ68CP4 663 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 LUZP1Q86V48 1076 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 CAMK1DQ8IU85 385 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 PHACTR4Q8IZ21 702 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 NPWQ8N729 165 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 TSEN2Q8NCE0 465 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms