RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 C11orf63Q6NUN7 778 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 ESRP1Q6NXG1 681 aaKnown RBP20.44■□□□□ 0.86
SS18-224ENST00000584083 SPOCD1Q6ZMY3 1216 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 SMIM14Q96QK8 99 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 TDRD1Q9BXT4 1180 aaKnown RBP20.44■□□□□ 0.86
SS18-224ENST00000584083 CEP41Q9BYV8 373 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 CLPBQ9H078 707 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 WDR26Q9H7D7 661 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 USP29Q9HBJ7 922 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 PCDH9Q9HC56 1237 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 GOLGA6AQ9NYA3 693 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 NCKIPSDQ9NZQ3 722 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 SALL4Q9UJQ4 1053 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.44■□□□□ 0.86
SS18-224ENST00000584083 A0A0J9YYE9 177 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 PSMD11O00231 422 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 CST8O60676 142 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 ZRANB2O95218 330 aaKnown RBP eCLIP20.43■□□□□ 0.86
SS18-224ENST00000584083 TNFP01375 233 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 TRBC1P01850 177 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 CD86P42081 329 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 KIAA1024LP59773 190 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 ELOCQ15369 112 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 TAZQ16635 292 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 RAD9BQ6WBX8 426 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 Q6ZVL8 140 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 B4GALNT4Q76KP1 1039 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 BZW1Q7L1Q6 419 aaKnown RBP20.43■□□□□ 0.86
SS18-224ENST00000584083 CCDC50Q8IVM0 306 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 KATNAL2Q8IYT4 538 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 PELI3Q8N2H9 469 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 FSTL5Q8N475 847 aaPredicted RBP20.43■□□□□ 0.86
SS18-224ENST00000584083 CNTD1Q8N815 330 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 LPCAT1Q8NF37 534 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 OR56A4Q8NGH8 313 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 GLMNQ92990 594 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 DTD2Q96FN9 168 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 AGAP3Q96P47 875 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 OLFM3Q96PB7 478 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 BRD8Q9H0E9 1235 aa20.43■□□□□ 0.86
SS18-224ENST00000584083 USP24Q9UPU5 2620 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 A0A0U1RQS6 177 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 CPED1A4D0V7 1026 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 RCCD1A6NED2 376 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 TRABD2BA6NFA1 517 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 TMEM202A6NGA9 273 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 PDE2AO00408 941 aaPredicted RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 YY2O15391 372 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 HOXC4P09017 264 aaPredicted RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 TRIM23P36406 574 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 NR2C2P49116 596 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 NR0B2Q15466 257 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 CDKN3Q16667 212 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 TFDP3Q5H9I0 405 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 FAM182AQ5T1J6 154 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 LRRC66Q68CR7 880 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 CRTC1Q6UUV9 634 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 NYAP1Q6ZVC0 841 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 CBARPQ8N350 705 aaPredicted RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 SPC24Q8NBT2 197 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 SCG3Q8WXD2 468 aaKnown RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 OR1E3Q8WZA6 343 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 BAG1Q99933 345 aaPredicted RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 LGR4Q9BXB1 951 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 CCDC86Q9H6F5 360 aaKnown RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 PHPT1Q9NRX4 125 aaPredicted RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 SAE1Q9UBE0 346 aaPredicted RBP20.42■□□□□ 0.86
SS18-224ENST00000584083 MOSPD1Q9UJG1 213 aa20.42■□□□□ 0.86
SS18-224ENST00000584083 ASXL3Q9C0F0 2248 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 LY6G6EA0A0G2JKS1 128 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 PRLP01236 227 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 CELA2BP08218 269 aaPredicted RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 MMP2P08253 660 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 MARCKSL1P49006 195 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 RPIAP49247 311 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 RPL26P61254 145 aaKnown RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 SKOR1P84550 965 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 INSM1Q01101 510 aaPredicted RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 TARDBPQ13148 414 aaKnown RBP eCLIP20.41■□□□□ 0.862e-8■■□□□ 13.7
SS18-224ENST00000584083 C6orf132Q5T0Z8 1188 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 RAET1GQ6H3X3 334 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 KIAA1328Q86T90 577 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 HEATR4Q86WZ0 1026 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 GKN2Q86XP6 184 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 PDCD7Q8N8D1 485 aaKnown RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 ACRBPQ8NEB7 543 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 IFI44Q8TCB0 444 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 PDXPQ96GD0 296 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 RBM41Q96IZ5 413 aaKnown RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 CALR3Q96L12 384 aaKnown RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 ABCG4Q9H172 646 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 FGF22Q9HCT0 170 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 MRPL40Q9NQ50 206 aaKnown RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 DNPEPQ9ULA0 475 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 RPL26L1Q9UNX3 145 aaKnown RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 REXO2Q9Y3B8 237 aaKnown RBP20.41■□□□□ 0.86
SS18-224ENST00000584083 DUSP10Q9Y6W6 482 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 U3KQA8 63 aa20.41■□□□□ 0.86
SS18-224ENST00000584083 CAPN8A6NHC0 703 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms