RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 GMDSO60547 372 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SOAT2O75908 522 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 MICAL2O94851 1124 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 ALPPP05187 535 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SNRPB2P08579 225 aaKnown RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 UNGP13051 313 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 RORAP35398 523 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 HSD17B2P37059 387 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 NPY2RP49146 381 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 TPMTP51580 245 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 DGKQP52824 942 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 CDH13P55290 713 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 POU6F2P78424 691 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 TEKQ02763 1124 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 LAPTM5Q13571 262 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 HSD17B12Q53GQ0 312 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 ASPRV1Q53RT3 343 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 C6orf141Q5SZD1 244 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 PXDC1Q5TGL8 231 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SLC9A4Q6AI14 798 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 FAM109BQ6ICB4 259 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 BRAT1Q6PJG6 821 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 ZYG11AQ6WRX3 759 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 CATSPER4Q7RTX7 472 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 AMIGO1Q86WK6 493 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 KRT73Q86Y46 540 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 CPNE9Q8IYJ1 553 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 METTL4Q8N3J2 472 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 PHTF2Q8N3S3 785 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 APPL2Q8NEU8 664 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SLC22A17Q8WUG5 538 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SLC20A1Q8WUM9 679 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SLC7A6Q92536 515 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
SKA2-207ENST00000583380 PTP4A1Q93096 173 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 RNF34Q969K3 372 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 TESCQ96BS2 214 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 YIPF6Q96EC8 236 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 ZNF594Q96JF6 807 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 RNF170Q96K19 258 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SIGLEC10Q96LC7 697 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SERPINB11Q96P15 392 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 KLF6Q99612 283 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 HTATIP2Q9BUP3 242 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 KATNAL1Q9BW62 490 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 ZNF416Q9BWM5 594 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SLIRPQ9GZT3 109 aaKnown RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 IL22Q9GZX6 179 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 FAM49AQ9H0Q0 323 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 GAREM1Q9H706 876 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 IFT46Q9NQC8 304 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 ADPRHL2Q9NX46 363 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 SLC9A2Q9UBY0 812 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 FBXO40Q9UH90 709 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 AJAP1Q9UKB5 411 aaPredicted RBP9.43□□□□□ -0.9
SKA2-207ENST00000583380 STUB1Q9UNE7 303 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 KLHL20Q9Y2M5 609 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 LYVE1Q9Y5Y7 322 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 GJA3Q9Y6H8 435 aa9.43□□□□□ -0.9
SKA2-207ENST00000583380 CICQ96RK0 1608 aaPredicted RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 CNTNAP4Q9C0A0 1308 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 A0A075B6Q4 140 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 PQLC2LA1A4F0 135 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 TTC24A2A3L6 582 aaPredicted RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 CCDC182A6NF36 153 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 GRXCR2A6NFK2 248 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 CCDC154A6NI56 674 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 APOC4-APOC2K7ER74 178 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 SNAP23O00161 211 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 KPNA3O00505 521 aaPredicted RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 ABCD4O14678 606 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 PRPSAP2O60256 369 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 TSC22D2O75157 780 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 PTP4A3O75365 173 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 CABYRO75952 493 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 OR2B3O76000 313 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 SLC22A5O76082 557 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 ALDH1A2O94788 518 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 RHOBTB1O94844 696 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 SOX30O94993 753 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 LDOC1O95751 146 aaPredicted RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 LSM8O95777 96 aaKnown RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 GOT2P00505 430 aaKnown RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 IFNB1P01574 187 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 APOC2P02655 101 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 ITGB1P05556 798 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 THRBP10828 461 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 NPR1P16066 1061 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 CKMT2P17540 419 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 BTF3P20290 206 aaKnown RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 CPN2P22792 545 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 MMP8P22894 467 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 RFC4P35249 363 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 RFC2P35250 354 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 STARP49675 285 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 CPT1AP50416 773 aa9.42□□□□□ -0.9
SKA2-207ENST00000583380 NKX2-5P52952 324 aaPredicted RBP9.42□□□□□ -0.9
SKA2-207ENST00000583380 SCN1BQ07699 218 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms