RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CDC42EP4Q9H3Q1 356 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LRRC4CQ9HCJ2 640 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NINJ2Q9NZG7 142 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SAMD15Q9P1V8 674 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 B4GALT6Q9UBX8 382 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZC3H7BQ9UGR2 993 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RIMKLBQ9ULI2 386 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZNF711Q9Y462 761 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 KCTD3Q9Y597 815 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GPR179Q6PRD1 2367 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 A0A0U1RQS6 177 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 A0A1W2PP55 124 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 C2orf81A6NN90 581 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 A8MX80 341 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SPINT1O43278 529 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PAPSS2O95340 614 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CLDN7O95471 211 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TSHRP16473 764 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PGAM1P18669 254 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PSMA3P25788 255 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NMBRP28336 390 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 VIPR1P32241 457 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PTSQ03393 145 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SFSWAPQ12872 951 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SEPT6Q14141 434 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 KYNUQ16719 465 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TMEM52BQ4KMG9 183 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ANKRD20A4Q4UJ75 823 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LRRC73Q5JTD7 316 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TSTD2Q5T7W7 516 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ERAP2Q6P179 960 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 USP30Q70CQ3 517 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TRMT10CQ7L0Y3 403 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 DPPA4Q7L190 304 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GLT6D1Q7Z4J2 308 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TSPAN33Q86UF1 283 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SUMF1Q8NBK3 374 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 STYXQ8WUJ0 223 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 EID2BQ96D98 161 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZNF778Q96MU6 729 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FCRL3Q96P31 734 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 OMDQ99983 421 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TRIM56Q9BRZ2 755 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GPR63Q9BZJ6 419 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZFYVE1Q9HBF4 777 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PLAC1Q9HBJ0 212 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ITM2CQ9NQX7 267 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FADS3Q9Y5Q0 445 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ARL5AQ9Y689 179 aa16.37■□□□□ 0.21
CDK5RAP3-228ENST00000583363 C1orf232A0A0U1RR37 186 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 AP1G1O43747 822 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RNASEH2AO75792 299 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 USP1O94782 785 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ALDH1A2O94788 518 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TTC4O95801 387 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GSTA2P09210 222 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LPOP22079 712 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LHCGRP22888 699 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 HMGCLP35914 325 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TAS2R38P59533 333 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GPX6P59796 221 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PDE1BQ01064 536 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ELP6Q0PNE2 266 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RALGDSQ12967 914 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SKIDA1Q1XH10 827 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 AGBL4Q5VU57 503 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 STEAP4Q687X5 459 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ESRP1Q6NXG1 681 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CES3Q6UWW8 571 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 UNC5AQ6ZN44 842 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 C3orf62Q6ZUJ4 267 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CACUL1Q86Y37 369 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MREGQ8N565 214 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TSTD1Q8NFU3 115 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GANCQ8TET4 914 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 HMGB4Q8WW32 186 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PEX13Q92968 403 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MFSD3Q96ES6 412 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CFAP36Q96G28 342 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TTC25Q96NG3 672 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TREX1Q9NSU2 369 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 IL17CQ9P0M4 197 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SERGEFQ9UGK8 458 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 EBF1Q9UH73 591 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NCKAP1Q9Y2A7 1128 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RPS6KL1Q9Y6S9 549 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FAM169AQ9Y6X4 670 aa16.36■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZCWPW2A0A1B0GU75 182 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SLC7A4O43246 635 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 BUD23O43709 281 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 POLBP06746 335 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ACADMP11310 421 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZNF30P17039 623 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SSTR1P30872 391 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MMP12P39900 470 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms