RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 KRT12Q99456 494 aa9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 EPAS1Q99814 870 aa9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 CCDC3Q9BQI4 270 aa9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 AP1M1Q9BXS5 423 aa9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 RAB6CQ9H0N0 254 aa9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 ARGLU1Q9NWB6 273 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 LCMT1Q9UIC8 334 aa9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
CDK5RAP3-227ENST00000583352 CHD5Q8TDI0 1954 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 C2CD4BA6NLJ0 364 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 B8ZZF3 427 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 FAM72CH0Y354 149 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 CCDC188H7C350 402 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 K7ENP7 123 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 SPOPO43791 374 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 TMCC1O94876 653 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 RASGRP1O95267 797 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 ALPIP09923 528 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 C6P13671 934 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 CTSEP14091 401 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 MCM3P25205 808 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 RFC1P35251 1148 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 PTPN9P43378 593 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 SUOXP51687 545 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 PDX1P52945 283 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 RHOAP61586 193 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 MRPS25P82663 173 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 SLC7A5Q01650 507 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 ELP6Q0PNE2 266 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 IRF4Q15306 451 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 ELOCQ15369 112 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 SIX1Q15475 284 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 LONRF2Q1L5Z9 754 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 FAM72AQ5TYM5 149 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 FAM72DQ6L9T8 149 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 CCDC70Q6NSX1 233 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 DNAJC24Q6P3W2 148 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 INO80CQ6PI98 192 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 LVRNQ6Q4G3 990 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 TMCO3Q6UWJ1 677 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 STRADAQ7RTN6 431 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 FAM72BQ86X60 149 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 SLC13A5Q86YT5 568 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 ARL10Q8N8L6 244 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 NIPA2Q8N8Q9 360 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 TP53I13Q8NBR0 393 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 NTAN1Q96AB6 310 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 MED8Q96G25 268 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 LIN37Q96GY3 246 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 NAP1L3Q99457 506 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 WRAP53Q9BUR4 548 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 SEMA4CQ9C0C4 833 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 CLPBQ9H078 707 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 ARFGAP3Q9NP61 516 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 MBNL1Q9NR56 388 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 DKK3Q9UBP4 350 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 GULP1Q9UBP9 304 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 PNMA8BQ9ULN7 279 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 NEU3Q9UQ49 428 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 MFHAS1Q9Y4C4 1052 aa9.78□□□□□ -0.84
CDK5RAP3-227ENST00000583352 PMS2P1A4D2B8 440 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TMX2-CTNND1H3BSU7 103 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 NTN3O00634 580 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MAP2K7O14733 419 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RAD51CO43502 376 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SEC31AO94979 1220 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ITGA2BP08514 1039 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RARAP10276 462 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KRT3P12035 628 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TIMP2P16035 220 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ITIH2P19823 946 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HTR1BP28222 390 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HK3P52790 923 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CLN3Q13286 438 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 EIF3IQ13347 325 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PIGHQ14442 188 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LRRC14Q15048 493 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PPP2R5EQ16537 467 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CYP1B1Q16678 543 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TMEM52BQ4KMG9 183 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 INO80DQ53TQ3 878 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LRRC38Q5VT99 294 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KIAA1614Q5VZ46 1190 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 GKN2Q86XP6 184 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HID1Q8IV36 788 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RHOT1Q8IXI2 618 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KLHL7Q8IXQ5 586 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KATNAL2Q8IYT4 538 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SDR16C5Q8N3Y7 309 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FBXO39Q8N4B4 442 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ARFGAP1Q8N6T3 406 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CCDC185Q8N715 623 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RTL3Q8N8U3 475 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PRELID2Q8N945 189 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KYQ8NBH2 561 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ATL2Q8NHH9 583 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PCDH19Q8TAB3 1148 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 JOSD2Q8TAC2 188 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FNIP1Q8TF40 1166 aa9.77□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FAM172AQ8WUF8 416 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms