RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 DNPEPQ9ULA0 475 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 PCNX2A6NKB5 2137 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 GOLGA6L9A6NEM1 432 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 F5H423 210 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 PSMD11O00231 422 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 FFAR2O15552 330 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 PMPCBO75439 489 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 PIAS2O75928 621 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 LDOC1O95751 146 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 PRLP01236 227 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 CSF2P04141 144 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 FTH1P19P0C7X4 201 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 NME1P15531 152 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 GM2AP17900 193 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 NFKB1P19838 968 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 RBL1P28749 1068 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 ETV3P41162 512 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 EIF2B5Q13144 721 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 NFATC4Q14934 902 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 QPCTQ16769 361 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 FAXCQ5TGI0 409 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 DARS2Q6PI48 645 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 CRTC1Q6UUV9 634 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 ENPP7Q6UWV6 458 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 Q6ZVL8 140 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 KANSL1Q7Z3B3 1105 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 GLRX5Q86SX6 157 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 CDKL3Q8IVW4 592 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 PHACTR4Q8IZ21 702 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 ZNF567Q8N184 647 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 ANP32BQ92688 251 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 DTD2Q96FN9 168 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 HES6Q96HZ4 224 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 CNDP2Q96KP4 475 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 ALS2CR12Q96Q35 445 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 VAT1Q99536 393 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 MLPHQ9BV36 600 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 C10orf88Q9H8K7 445 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 KCTD5Q9NXV2 234 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 UBP1Q9NZI7 540 aa12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-218ENST00000582955 C1orf232A0A0U1RR37 186 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ANKRD66B4E2M5 251 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 CACNB4O00305 520 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ENC1O14682 589 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 TNFSF14O43557 240 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 MT-CYBP00156 380 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 C1SP09871 688 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ATXN1LP0C7T5 689 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ALPPL2P10696 532 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 RBP3P10745 1247 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ZNF30P17039 623 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 PMLP29590 882 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 CD68P34810 354 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 PPARDQ03181 441 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 CDK18Q07002 472 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 RAET1GQ6H3X3 334 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 CCDC70Q6NSX1 233 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ESRP1Q6NXG1 681 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 PNCKQ6P2M8 343 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 RD3Q7Z3Z2 195 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 HID1Q8IV36 788 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 SLC25A45Q8N413 288 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 PNPLA1Q8N8W4 532 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ZNF548Q8NEK5 533 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 ATL2Q8NHH9 583 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 LMX1AQ8TE12 382 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 BTN2A2Q8WVV5 523 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 WDR92Q96MX6 357 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 SLC13A1Q9BZW2 595 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 TCEAL2Q9H3H9 227 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 WDR26Q9H7D7 661 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 KLQ9UEF7 1012 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 APOBEC3BQ9UH17 382 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 RSPH14Q9UHP6 348 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 CD84Q9UIB8 345 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 KLF15Q9UIH9 416 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 NCOR2Q9Y618 2525 aa12.6□□□□□ -0.39
SMARCE1-218ENST00000582955 TDRD6O60522 2096 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 NEMP2A6NFY4 417 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 K7ESM1 405 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 KCNN4O15554 427 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 AQP9O43315 295 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 STK10O94804 968 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 CLDN7O95471 211 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 SLC4A1P02730 911 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 TSHRP16473 764 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 KELP23276 732 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 BLKP51451 505 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 STC1P52823 247 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 KIAA1024LP59773 190 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 PTSQ03393 145 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 RPS6KA1Q15418 735 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 SLC14A2Q15849 920 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms