RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 CSNK1DP48730 415 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 NDST2P52849 883 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 AIF1P55008 147 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 TRIM14Q14142 442 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 CLPPQ16740 277 aaPredicted RBP13.6□□□□□ -0.23
SS18-222ENST00000582792 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
SS18-222ENST00000582792 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 SCYL2Q6P3W7 929 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 LIPIQ6XZB0 460 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 DPPA4Q7L190 304 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 ZNF438Q7Z4V0 828 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 SRLQ86TD4 932 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 C17orf82Q86X59 251 aaPredicted RBP13.6□□□□□ -0.23
SS18-222ENST00000582792 C3orf20Q8ND61 904 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 ECHDC3Q96DC8 303 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 LGR4Q9BXB1 951 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 WDR26Q9H7D7 661 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 RDH14Q9HBH5 336 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 CYP4F12Q9HCS2 524 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 NLRC4Q9NPP4 1024 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 DONSONQ9NYP3 566 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 LRRK2Q5S007 2527 aa13.6□□□□□ -0.23
SS18-222ENST00000582792 ARHGEF17Q96PE2 2063 aaPredicted RBP13.6□□□□□ -0.23
SS18-222ENST00000582792 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 PRSS38A1L453 326 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 SIGLEC16A6NMB1 481 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 PDE2AO00408 941 aaPredicted RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 HGSO14964 777 aaPredicted RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 CALB1P05937 261 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 CCL4P13236 92 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 CCNB1P14635 433 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 FERP16591 822 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 GM2AP17900 193 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 HTR7P34969 479 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 ZNF143P52747 638 aaPredicted RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 MAZP56270 477 aaKnown RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 OR1D5P58170 312 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 TLE1Q04724 770 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 NR1D2Q14995 579 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 AMZ1Q400G9 498 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 PNCKQ6P2M8 343 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 PHF13Q86YI8 300 aaPredicted RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 TSEN2Q8NCE0 465 aaKnown RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 GPBAR1Q8TDU6 330 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 TAAR9Q96RI9 348 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 PCDHB18PQ96TA0 734 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 NUDT22Q9BRQ3 303 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 SLC12A9Q9BXP2 914 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 ADNPQ9H2P0 1102 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 SPATS2LQ9NUQ6 558 aaKnown RBP13.59□□□□□ -0.23
SS18-222ENST00000582792 AIPL1Q9NZN9 384 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 MOSPD1Q9UJG1 213 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 CAPN11Q9UMQ6 739 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 PCDHGA3Q9Y5H0 932 aa13.59□□□□□ -0.23
SS18-222ENST00000582792 IGHV5-10-1A0A0J9YXX1 117 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 TCRBV5S1A1TA0A578 114 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 RHPN2P1A8MT19 583 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 ZW10O43264 779 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 PALMO75781 387 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 FGF1P05230 155 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 FGF3P11487 239 aaPredicted RBP13.58□□□□□ -0.24
SS18-222ENST00000582792 ALDH4A1P30038 563 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 ATP1A2P50993 1020 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 PAPOLAP51003 745 aaKnown RBP13.58□□□□□ -0.24
SS18-222ENST00000582792 ARSDP51689 593 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 TPI1P60174 286 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 POLR2LP62875 67 aaKnown RBP13.58□□□□□ -0.24
SS18-222ENST00000582792 ZBED6P86452 979 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 BCL2L1Q07817 233 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 CLEC16AQ2KHT3 1053 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 BORAQ6PGQ7 559 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 MON1BQ7L1V2 547 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 NRROSQ86YC3 692 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 VSTM4Q8IW00 320 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 PELI3Q8N2H9 469 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 RCBTB1Q8NDN9 531 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 ZDHHC1Q8WTX9 485 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 JPH3Q8WXH2 748 aaPredicted RBP13.58□□□□□ -0.24
SS18-222ENST00000582792 NKD1Q969G9 470 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 MRFAP1L1Q96HT8 127 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 CELF6Q96J87 481 aaKnown RBP13.58□□□□□ -0.24
SS18-222ENST00000582792 TRIM5Q9C035 493 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 SLC39A8Q9C0K1 460 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 RELNP78509 3460 aa13.58□□□□□ -0.24
SS18-222ENST00000582792 DOPEY2Q9Y3R5 2298 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 ANKRD62A6NC57 917 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 ARHGAP42A6NI28 874 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 TRAFD1O14545 582 aaPredicted RBP13.57□□□□□ -0.24
SS18-222ENST00000582792 MYCLP1P12525 358 aaPredicted RBP13.57□□□□□ -0.24
SS18-222ENST00000582792 CD1CP29017 333 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 PRKCIP41743 596 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 GPR3P46089 330 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 RPL7AP62424 266 aaKnown RBP13.57□□□□□ -0.24
SS18-222ENST00000582792 NSUN2Q08J23 767 aaKnown RBP eCLIP13.57□□□□□ -0.24
SS18-222ENST00000582792 ILF3Q12906 894 aaKnown RBP eCLIP13.57□□□□□ -0.24
SS18-222ENST00000582792 TRA2AQ13595 282 aaKnown RBP eCLIP13.57□□□□□ -0.24
SS18-222ENST00000582792 ACOX1Q15067 660 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 DNAJC24Q6P3W2 148 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 IRF2BP2Q7Z5L9 587 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms