RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	KEL	P23276	732 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	AK4	P27144	223 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CCKBR	P32239	447 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	VIPR1	P32241	457 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TRIM23	P36406	574 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ARL4A	P40617	200 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ETV5	P41161	510 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ETV3	P41162	512 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	GNPDA1	P46926	289 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	RENBP	P51606	427 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MAPK10	P53779	464 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TRAF2	Q12933	501 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MAP9	Q49MG5	647 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	FILIP1L	Q4L180	1135 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	OGFOD3	Q6PK18	319 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	DOK6	Q6PKX4	331 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TMCO3	Q6UWJ1	677 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	RFLNA	Q6ZTI6	216 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HSD11B1L	Q7Z5J1	315 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	POLN	Q7Z5Q5	900 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SPRED1	Q7Z699	444 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TSPAN33	Q86UF1	283 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	FNIP1	Q8TF40	1166 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PATE1	Q8WXA2	126 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SMIM14	Q96QK8	99 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SEMA6C	Q9H3T2	930 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	RDH14	Q9HBH5	336 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	AIPL1	Q9NZN9	384 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	APPL1	Q9UKG1	709 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SSUH2	Q9Y2M2	353 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SCIN	Q9Y6U3	715 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	UNC13C	Q8NB66	2214 aa		11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HELZ2	Q9BYK8	2649 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TMX2-CTNND1	H3BSU7	103 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TNFRSF10C	O14798	259 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HTRA2	O43464	458 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HEXIM1	O94992	359 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	FUCA1	P04066	466 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CEACAM5	P06731	702 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MYCLP1	P12525	358 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	GZMA	P12544	262 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ALDH4A1	P30038	563 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MLLT3	P42568	568 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	POLD2	P49005	469 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HCAR3	P49019	387 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	OR1D5	P58170	312 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	EIF3I	Q13347	325 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	DPYSL2	Q16555	572 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	RAET1G	Q6H3X3	334 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SLC30A9	Q6PML9	568 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	VASH2	Q86V25	355 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZFAND4	Q86XD8	727 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NRROS	Q86YC3	692 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PSTK	Q8IV42	348 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ATPAF2	Q8N5M1	289 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	LZTR1	Q8N653	840 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	KIAA1524	Q8TCG1	905 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZDHHC1	Q8WTX9	485 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SNRNP27	Q8WVK2	155 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	USP7	Q93009	1102 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	WBP1	Q96G27	269 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZNF599	Q96NL3	588 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CSPG4P5	Q96PW8	444 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NUDCD1	Q96RS6	583 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NAT10	Q9H0A0	1025 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NT5M	Q9NPB1	228 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	FOXJ2	Q9P0K8	574 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CD84	Q9UIB8	345 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SUFU	Q9UMX1	484 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PLEKHM1	Q9Y4G2	1056 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PCDHGA7	Q9Y5G6	932 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZNF462	Q96JM2	2506 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CFAP46	Q8IYW2	2715 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SCN8A	Q9UQD0	1980 aa		11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	RHPN2P1	A8MT19	583 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SMTNL1	A8MU46	457 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114		J3QKU1	62 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PDE2A	O00408	941 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MAFK	O60675	156 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SOCS5	O75159	536 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ECEL1	O95672	775 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MBD3	O95983	291 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	FGF1	P05230	155 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HOXC4	P09017	264 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	RARA	P10276	462 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CCNB1	P14635	433 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CR2	P20023	1033 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PCK1	P35558	622 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	GJC1	P36383	396 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PRKCI	P41743	596 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SSR1	P43307	286 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MMP13	P45452	471 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms