RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 GPR34Q9UPC5 381 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 PPIL1Q9Y3C6 166 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 PCDHGA8Q9Y5G5 932 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 TTC24A2A3L6 582 aaPredicted RBP20.95■□□□□ 0.94
CCDC42-203ENST00000581598 TMEM202A6NGA9 273 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 PSMD11O00231 422 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 PDE2AO00408 941 aaPredicted RBP20.95■□□□□ 0.94
CCDC42-203ENST00000581598 HEXIM1O94992 359 aaKnown RBP20.95■□□□□ 0.94
CCDC42-203ENST00000581598 LCA5LO95447 670 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 CYP2A6P11509 494 aaPredicted RBP20.95■□□□□ 0.94
CCDC42-203ENST00000581598 MLLT3P42568 568 aaPredicted RBP20.95■□□□□ 0.94
CCDC42-203ENST00000581598 MMP13P45452 471 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 TRAF2Q12933 501 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 ACOX1Q15067 660 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 CNGA3Q16281 694 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 SLC18A3Q16572 532 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 PNCKQ6P2M8 343 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 OGFOD3Q6PK18 319 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 CRTC1Q6UUV9 634 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 RD3Q7Z3Z2 195 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 GPR156Q8NFN8 814 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 ZNF564Q8TBZ8 553 aaPredicted RBP20.95■□□□□ 0.94
CCDC42-203ENST00000581598 SCRN2Q96FV2 425 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 ZNF830Q96NB3 372 aaPredicted RBP20.95■□□□□ 0.94
CCDC42-203ENST00000581598 WDR26Q9H7D7 661 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 THSD1Q9NS62 852 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 UVRAGQ9P2Y5 699 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 GULP1Q9UBP9 304 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 LCMT1Q9UIC8 334 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 KIF26BQ2KJY2 2108 aa20.95■□□□□ 0.94
CCDC42-203ENST00000581598 A0A1W2PNU3 283 aaPredicted RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 TEAD1P28347 426 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 DEKP35659 375 aaKnown RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 CYLC1P35663 651 aaPredicted RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 PDX1P52945 283 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 TLE3Q04726 772 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 SPIDRQ14159 915 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 PAFAH1B3Q15102 231 aaKnown RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 KCTD16Q68DU8 428 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 NYAP1Q6ZVC0 841 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 SPACA3Q8IXA5 215 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 FATE1Q969F0 183 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 NUS1Q96E22 293 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 ATXN7L3BQ96GX2 97 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 PRR11Q96HE9 360 aaPredicted RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 MCCC1Q96RQ3 725 aaPredicted RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 UBL7Q96S82 380 aaPredicted RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 DEF6Q9H4E7 631 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 SATB2Q9UPW6 733 aa20.94■□□□□ 0.94
CCDC42-203ENST00000581598 EPN1Q9Y6I3 576 aaPredicted RBP20.94■□□□□ 0.94
CCDC42-203ENST00000581598 ARHGEF17Q96PE2 2063 aaPredicted RBP20.93■□□□□ 0.94
CCDC42-203ENST00000581598 AKR1B10O60218 316 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 PROSCO94903 275 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 NDUFA10O95299 355 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 PGLSO95336 258 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 CD48P09326 243 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 MYCLP1P12525 358 aaPredicted RBP20.93■□□□□ 0.94
CCDC42-203ENST00000581598 GARSP41250 739 aaKnown RBP20.93■□□□□ 0.94
CCDC42-203ENST00000581598 MAXP61244 160 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 GALNT2Q10471 571 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 DPYSL3Q14195 570 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 PDK2Q15119 407 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 C3orf38Q5JPI3 329 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 ARMC12Q5T9G4 340 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 ALG1LQ6GMV1 187 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 PELI3Q8N2H9 469 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 WDR36Q8NI36 951 aaKnown RBP20.93■□□□□ 0.94
CCDC42-203ENST00000581598 PDCD6IPQ8WUM4 868 aaKnown RBP20.93■□□□□ 0.94
CCDC42-203ENST00000581598 MAML1Q92585 1016 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 CCDC74AQ96AQ1 378 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 DTD2Q96FN9 168 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 SLC46A1Q96NT5 459 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 BBC3Q96PG8 261 aaPredicted RBP20.93■□□□□ 0.94
CCDC42-203ENST00000581598 LGMNQ99538 433 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 ZNF670Q9BS34 389 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 LGR4Q9BXB1 951 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 TEX101Q9BY14 249 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 SIRPGQ9P1W8 387 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 AMACRQ9UHK6 382 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 RAI2Q9Y5P3 530 aa20.93■□□□□ 0.94
CCDC42-203ENST00000581598 A8MX80 341 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 MFSD11O43934 449 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 FZD6O60353 706 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 PNLIPP16233 465 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 LHCGRP22888 699 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 CES1P23141 567 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 SKOR1P84550 965 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 MMRN1Q13201 1228 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 NCBP2-AS2Q69YL0 99 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 TIGD7Q6NT04 549 aaPredicted RBP20.92■□□□□ 0.94
CCDC42-203ENST00000581598 USP45Q70EL2 814 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 PIH1D2Q8WWB5 315 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 LIN37Q96GY3 246 aaPredicted RBP20.92■□□□□ 0.94
CCDC42-203ENST00000581598 TSGA13Q96PP4 275 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 MRPL40Q9NQ50 206 aaKnown RBP20.92■□□□□ 0.94
CCDC42-203ENST00000581598 PHPT1Q9NRX4 125 aaPredicted RBP20.92■□□□□ 0.94
CCDC42-203ENST00000581598 SPTLC3Q9NUV7 552 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 RABGEF1Q9UJ41 708 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 APPL1Q9UKG1 709 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms