RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ZNF235Q14590 738 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 LBRQ14739 615 aaKnown RBP17.92■□□□□ 0.46
MKS1-209ENST00000580127 LINC00303Q3SY05 128 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 ZFAND4Q86XD8 727 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 ZSWIM9Q86XI8 627 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 ZDHHC1Q8WTX9 485 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 NUS1Q96E22 293 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 TAAR9Q96RI9 348 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 ERGIC2Q96RQ1 377 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 ZWILCHQ9H900 591 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 STARD5Q9NSY2 213 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 LIMA1Q9UHB6 759 aaKnown RBP17.92■□□□□ 0.46
MKS1-209ENST00000580127 PCSK1NQ9UHG2 260 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 SCN8AQ9UQD0 1980 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 LRRC10BA6NIK2 292 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 ARHGAP6O43182 974 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 RGRP47804 291 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 TRA2AQ13595 282 aaKnown RBP eCLIP17.91■□□□□ 0.46
MKS1-209ENST00000580127 SLITRK4Q8IW52 837 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 PDCD6IPQ8WUM4 868 aaKnown RBP17.91■□□□□ 0.46
MKS1-209ENST00000580127 SPOCK2Q92563 424 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 LGR4Q9BXB1 951 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 SEMA6CQ9H3T2 930 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 ANO10Q9NW15 660 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 GPATCH2LQ9NWQ4 482 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 MYO6Q9UM54 1294 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 PHTF1Q9UMS5 762 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 PCDHGA4Q9Y5G9 962 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 SPTA1P02549 2419 aa17.91■□□□□ 0.46
MKS1-209ENST00000580127 GOLGA6CA6NDK9 693 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 GOLGA6BA6NDN3 693 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.9■□□□□ 0.46
MKS1-209ENST00000580127 AGRPO00253 132 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 TRAFD1O14545 582 aaPredicted RBP17.9■□□□□ 0.46
MKS1-209ENST00000580127 B4GAT1O43505 415 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 SOCS5O75159 536 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 PPFIA2O75334 1257 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 FGF1P05230 155 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 GOLGA6DP0CG33 693 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 VIPR1P32241 457 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 CSTF2P33240 577 aaKnown RBP eCLIP17.9■□□□□ 0.46
MKS1-209ENST00000580127 OR1D5P58170 312 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 MYL5Q02045 173 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 RALGPS1Q5JS13 557 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 DENND2CQ68D51 928 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 DTX1Q86Y01 620 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 AGBL5Q8NDL9 886 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 COQ10AQ96MF6 247 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 TEX101Q9BY14 249 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 ASPSCR1Q9BZE9 553 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 RDH14Q9HBH5 336 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 SPATS2LQ9NUQ6 558 aaKnown RBP17.9■□□□□ 0.46
MKS1-209ENST00000580127 GOLGA6AQ9NYA3 693 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 TAAR2Q9P1P5 351 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 B4GALT6Q9UBX8 382 aa17.9■□□□□ 0.46
MKS1-209ENST00000580127 H3BRJ5 948 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 PSMD11O00231 422 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 ATP1A3P13637 1013 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 ARL4AP40617 200 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 GNPDA1P46926 289 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 PPM1FP49593 454 aaPredicted RBP17.89■□□□□ 0.45
MKS1-209ENST00000580127 TBR1Q16650 682 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 PLEKHA7Q6IQ23 1121 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 VASH2Q86V25 355 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 HEATR4Q86WZ0 1026 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 IL22RA1Q8N6P7 574 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 CCL4L1Q8NHW4 92 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 FNIP1Q8TF40 1166 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 SNRNP25Q9BV90 132 aaKnown RBP17.89■□□□□ 0.45
MKS1-209ENST00000580127 ADNPQ9H2P0 1102 aa17.89■□□□□ 0.45
MKS1-209ENST00000580127 SUDS3Q9H7L9 328 aaPredicted RBP17.89■□□□□ 0.45
MKS1-209ENST00000580127 TMEM191CA6NGB0 347 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 TMCO5BA8MYB1 307 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 C9orf172C9J069 976 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 CAPN5O15484 640 aaPredicted RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 HTRA2O43464 458 aaPredicted RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 HEXIM1O94992 359 aaKnown RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 ECEL1O95672 775 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 CPP00450 1065 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 CEACAM5P06731 702 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 PYGLP06737 847 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 FAM87AP0C7U9 286 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 TEAD1P28347 426 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 ETV5P41161 510 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 NOP2P46087 812 aaKnown RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 OGDHQ02218 1023 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 SLC10A7Q0GE19 358 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 SQSTM1Q13501 440 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 BOLA3Q53S33 107 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 KCTD16Q68DU8 428 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 NYAP1Q6ZVC0 841 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 USP45Q70EL2 814 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 ZNF438Q7Z4V0 828 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 C17orf82Q86X59 251 aaPredicted RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 ARHGAP12Q8IWW6 846 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 OR4D9Q8NGE8 314 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 TRIM11Q96F44 468 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 NUDCD1Q96RS6 583 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 KCTD15Q96SI1 283 aaPredicted RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 CDH19Q9H159 772 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms