RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 BIRC2Q13490 618 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CNGA3Q16281 694 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TIGD7Q6NT04 549 aaPredicted RBP17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 PGBD5Q8N414 524 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 Q8N9G6 341 aaPredicted RBP17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 HIC2Q96JB3 615 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 COQ10AQ96MF6 247 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 SLC46A1Q96NT5 459 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 DPH1Q9BZG8 443 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TMEM168Q9H0V1 697 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ZNHIT6Q9NWK9 470 aaKnown RBP17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TTLL3Q9Y4R7 772 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ATRXP46100 2492 aa17.55■□□□□ 0.4
SLC9A3R1-203ENST00000578958 PRSS38A1L453 326 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TNFSF15O95150 251 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 PGLSO95336 258 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GYPCP04921 128 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TPM1P09493 284 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 H2AFZP0C0S5 128 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 MYCLP1P12525 358 aaPredicted RBP17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CTPS1P17812 591 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CASP14P31944 242 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ETV3P41162 512 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CCL7P80098 99 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TRAF2Q12933 501 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 RAET1GQ6H3X3 334 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 H2AFVQ71UI9 128 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 HEATR4Q86WZ0 1026 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 KIAA1524Q8TCG1 905 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 SPOCK2Q92563 424 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 SCRN2Q96FV2 425 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 NSMCE3Q96MG7 304 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 SEMA3CQ99985 751 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 LGR4Q9BXB1 951 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 POLR1EQ9GZS1 481 aaKnown RBP17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 LRRN3Q9H3W5 708 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CARS2Q9HA77 564 aaKnown RBP17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ASCL3Q9NQ33 180 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 UVRAGQ9P2Y5 699 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 LCMT1Q9UIC8 334 aa17.54■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ASXL3Q9C0F0 2248 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TEX51A0A1B0GUA7 166 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 PSMD11O00231 422 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ZW10O43264 779 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CBFA2T2O43439 604 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 KRT7P08729 469 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CD48P09326 243 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GLB1P16278 677 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CA4P22748 312 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GARSP41250 739 aaKnown RBP17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 INHBCP55103 352 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ILF3Q12906 894 aaKnown RBP eCLIP17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 PDK2Q15119 407 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 IGF2-ASQ6U949 168 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CCNJLQ8IV13 435 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 FBXO39Q8N4B4 442 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GPR156Q8NFN8 814 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 DTD2Q96FN9 168 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 TMEM74Q96NL1 305 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 BBC3Q96PG8 261 aaPredicted RBP17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GSDMCQ9BYG8 508 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 LRIT1Q9P2V4 623 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 RABGEF1Q9UJ41 708 aa17.53■□□□□ 0.4
SLC9A3R1-203ENST00000578958 LOC400499M0QZD8 3231 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 NPIPB15A6NHN6 443 aaPredicted RBP17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 NTN3O00634 580 aaPredicted RBP17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 MFSD11O43934 449 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 PROSCO94903 275 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GM2AP17900 193 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 MX2P20592 715 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 CES1P23141 567 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 IL4RP24394 825 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 MLLT3P42568 568 aaPredicted RBP17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GPR1P46091 355 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 GNPDA1P46926 289 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 EIF3IQ13347 325 aaKnown RBP17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 PEX6Q13608 980 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 DPYSL3Q14195 570 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 IFI16Q16666 785 aaKnown RBP17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ATP13A4Q4VNC1 1196 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 C14orf28Q4W4Y0 310 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ANKRD20A8PQ5CZ79 823 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 KCTD16Q68DU8 428 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 SPECC1LQ69YQ0 1117 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 Q6ZVL8 140 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 RAB11FIP2Q7L804 512 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 HSD11B1LQ7Z5J1 315 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 JAMLQ86YT9 394 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ZNF830Q96NB3 372 aaPredicted RBP17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ZNF670Q9BS34 389 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 FOXP3Q9BZS1 431 aa17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 XPO4Q9C0E2 1151 aaKnown RBP17.52■□□□□ 0.4
SLC9A3R1-203ENST00000578958 RBM22Q9NW64 420 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■■■□ 25.8
SLC9A3R1-203ENST00000578958 IGSF10Q6WRI0 2623 aa17.51■□□□□ 0.39
SLC9A3R1-203ENST00000578958 D6RAR5 112 aa17.51■□□□□ 0.39
SLC9A3R1-203ENST00000578958 PLD2O14939 933 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms