RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ACSL1P33121 698 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HADHAP40939 763 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DPP6P42658 865 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CHRNA4P43681 627 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CCR5P51681 352 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PLTPP55058 493 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SESN2P58004 480 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SEPT6Q14141 434 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PUM1Q14671 1186 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ACOX1Q15067 660 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TAF1AQ15573 450 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ELF2Q15723 593 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LRRC73Q5JTD7 316 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PCID2Q5JVF3 399 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 WDR45BQ5MNZ6 344 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LRRC66Q68CR7 880 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CENPUQ71F23 418 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LPCAT2Q7L5N7 544 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TRIM69Q86WT6 500 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HORMAD1Q86X24 394 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MAML2Q8IZL2 1156 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GPR161Q8N6U8 529 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GAB3Q8WWW8 586 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RLN3Q8WXF3 142 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SERPINB12Q96P63 405 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RANBP9Q96S59 729 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 C19orf43Q9BQ61 176 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RHOXF2Q9BQY4 288 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NAT9Q9BTE0 207 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 WRAP53Q9BUR4 548 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GPR174Q9BXC1 333 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CDH19Q9H159 772 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 A0A1W2PQU0 124 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TCRBV7S3A2A0A539 114 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SDR42E2A6NKP2 422 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 A8MX80 341 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 STX7O15400 261 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FSBPO95073 299 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LMNAP02545 664 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SLC4A1P02730 911 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PRKCGP05129 697 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LPOP22079 712 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ADRA1DP25100 572 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HMGCLP35914 325 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PI4KAP42356 2102 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LIG3P49916 1009 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TAS2R38P59533 333 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 OLIG2Q13516 323 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 POU6F1Q14863 301 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CNGA3Q16281 694 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HIF1AQ16665 826 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ANKRD22Q5VYY1 191 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DENND2CQ68D51 928 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 KIAA0895LQ68EN5 471 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DENND5AQ6IQ26 1287 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CASC4Q6P4E1 433 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CRTC1Q6UUV9 634 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LIPIQ6XZB0 460 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NRSN1Q8IZ57 195 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZCCHC9Q8N567 271 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ASB12Q8WXK4 309 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IFT81Q8WYA0 676 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NELL1Q92832 810 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PEX13Q92968 403 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ART4Q93070 314 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LRRC39Q96DD0 335 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MRM3Q9HC36 420 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CD93Q9NPY3 652 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RAB23Q9ULC3 237 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DMTF1Q9Y222 760 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ITM2BQ9Y287 266 aa11.28□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PLXNB3Q9ULL4 1909 aa11.27□□□□□ -0.6
CDK5RAP3-210ENST00000578733 WNT9AO14904 365 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MMP20O60882 483 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CLDN7O95471 211 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TUBBP07437 444 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PIRTP0C851 137 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 C6P13671 934 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TPH1P17752 444 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PAMP19021 973 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 AKT2P31751 481 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DMWDQ09019 674 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RALGDSQ12967 914 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZNF284Q2VY69 593 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LYSMD3Q7Z3D4 306 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TMC3Q7Z5M5 1100 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 EIF1ADQ8N9N8 165 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZBTB44Q8NCP5 570 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DENND6BQ8NEG7 585 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GABPB2Q8TAK5 448 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FAM174AQ8TBP5 190 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms