RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 IHHQ14623 411 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 SEL1L2Q5TEA6 688 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 CCDC70Q6NSX1 233 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 ENPP7Q6UWV6 458 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 DBX2Q6ZNG2 339 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 PID1Q7Z2X4 250 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 RD3Q7Z3Z2 195 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 HSD11B1LQ7Z5J1 315 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 CDKL3Q8IVW4 592 aaPredicted RBP19.51■□□□□ 0.71
SS18-209ENST00000578595 PHACTR4Q8IZ21 702 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 RBFAQ8N0V3 343 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 PNPLA1Q8N8W4 532 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 ATL2Q8NHH9 583 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 SPATA22Q8NHS9 363 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 LMX1AQ8TE12 382 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 SPOCK2Q92563 424 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 MCCC1Q96RQ3 725 aaPredicted RBP19.51■□□□□ 0.71
SS18-209ENST00000578595 SLC13A1Q9BZW2 595 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 SLC25A51Q9H1U9 297 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 C10orf88Q9H8K7 445 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 GPR27Q9NS67 375 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 KLQ9UEF7 1012 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 CD84Q9UIB8 345 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 DNPEPQ9ULA0 475 aa19.51■□□□□ 0.71
SS18-209ENST00000578595 ZFC3H1O60293 1989 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 C1orf232A0A0U1RR37 186 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 ENC1O14682 589 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 SCAMP1O15126 338 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 TNFSF14O43557 240 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 STK10O94804 968 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 MT-CYBP00156 380 aaPredicted RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 CSF2P04141 144 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 ATXN1LP0C7T5 689 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 RPL26P61254 145 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 CCZ1BP86790 482 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 CCZ1P86791 482 aaPredicted RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 DAB2P98082 770 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 PPARDQ03181 441 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 EIF2B5Q13144 721 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 NFATC4Q14934 902 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 AGERQ15109 404 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 RAET1GQ6H3X3 334 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 DARS2Q6PI48 645 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 CRTC1Q6UUV9 634 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 HID1Q8IV36 788 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 ZNF548Q8NEK5 533 aaPredicted RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 BAHD1Q8TBE0 780 aaPredicted RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 DTD2Q96FN9 168 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 IMP4Q96G21 291 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 TEKT5Q96M29 485 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 COQ10AQ96MF6 247 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 MLPHQ9BV36 600 aaPredicted RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 WDR26Q9H7D7 661 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 SUDS3Q9H7L9 328 aaPredicted RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 RSPH14Q9UHP6 348 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 RPL26L1Q9UNX3 145 aaKnown RBP19.5■□□□□ 0.71
SS18-209ENST00000578595 EFR3BQ9Y2G0 817 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 CEP295Q9C0D2 2601 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 SCN8AQ9UQD0 1980 aa19.5■□□□□ 0.71
SS18-209ENST00000578595 TPRP12270 2363 aaKnown RBP19.49■□□□□ 0.71
SS18-209ENST00000578595 NEMP2A6NFY4 417 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 PSMD11O00231 422 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 DDX3YO15523 660 aaKnown RBP19.49■□□□□ 0.71
SS18-209ENST00000578595 PIRTP0C851 137 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 RBP3P10745 1247 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 CTSEP14091 401 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 ZNF30P17039 623 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 SPINK2P20155 84 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 RBL1P28749 1068 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 PTPN7P35236 360 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 WASHC5Q12768 1159 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 DNAJC3Q13217 504 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 XRCC4Q13426 336 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 QPCTQ16769 361 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 PRRT3Q5FWE3 981 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 Q6ZVL8 140 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 BTN2A2Q8WVV5 523 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 TSACCQ96A04 125 aaPredicted RBP19.49■□□□□ 0.71
SS18-209ENST00000578595 WDR92Q96MX6 357 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 VAT1Q99536 393 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 KCTD5Q9NXV2 234 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 SPASTQ9UBP0 616 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 ANGPTL2Q9UKU9 493 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 DOLKQ9UPQ8 538 aa19.49■□□□□ 0.71
SS18-209ENST00000578595 CHD8Q9HCK8 2581 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 KCNN4O15554 427 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 AQP9O43315 295 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 HYAL3O43820 417 aaPredicted RBP19.48■□□□□ 0.71
SS18-209ENST00000578595 CLDN7O95471 211 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 PRLP01236 227 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 C1SP09871 688 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 TSHRP16473 764 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 GM2AP17900 193 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 KELP23276 732 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 GPR1P46091 355 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 CDK18Q07002 472 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 C1orf61Q13536 156 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 ESRP1Q6NXG1 681 aaKnown RBP19.48■□□□□ 0.71
SS18-209ENST00000578595 PNCKQ6P2M8 343 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 ZNF567Q8N184 647 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms