RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 C1orf146Q5VVC0 180 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 ZFP1Q6P2D0 407 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CNSTQ6PJW8 725 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 TXNDC11Q6PKC3 985 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 RSPO2Q6UXX9 243 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 NAPRTQ6XQN6 538 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CERS6Q6ZMG9 384 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 FRMD7Q6ZUT3 714 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 DDX53Q86TM3 631 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 MYLK4Q86YV6 388 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 CEP97Q8IW35 865 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 FAM217AQ8IXS0 508 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 SLC39A11Q8N1S5 342 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CPXM2Q8N436 756 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 KDM1BQ8NB78 822 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 HJURPQ8NCD3 748 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 RIN3Q8TB24 985 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 GIPC2Q8TF65 315 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 ZNF296Q8WUU4 475 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 DLG3Q92796 817 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.27□□□□□ -1.092e-9■■■■■ 43.2
SKA2-203ENST00000578105 ZNF689Q96CS4 500 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 CDKN2AIPNLQ96HQ2 116 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 NAF1Q96HR8 494 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 KLHL5Q96PQ7 755 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 TTC1Q99614 292 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 AARSD1Q9BTE6 412 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 THTPAQ9BU02 230 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 TDRD1Q9BXT4 1180 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 DERL2Q9GZP9 239 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 POMKQ9H5K3 350 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 ZNF385DQ9H6B1 395 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 EFCAB1Q9HAE3 211 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 MEAF6Q9HAF1 191 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 TAS2R13Q9NYV9 303 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CPSF2Q9P2I0 782 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 SLC7A8Q9UHI5 535 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 LSM7Q9UK45 103 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 YIPF1Q9Y548 306 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 ZFP37Q9Y6Q3 630 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 A0A088AWK7 358 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 A0A1W2PQ67 120 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 LCHNA4D1U4 455 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 C2orf71A6NGG8 1288 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 A8MT66 165 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 GOLGA8TH3BQL2 631 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 STX16-NPEPL1H3BU86 382 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 STX16O14662 325 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 AXIN1O15169 862 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 NVLO15381 856 aaKnown RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 MAP3K7O43318 606 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 DCXO43602 365 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 ENTPD5O75356 428 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 FGF19O95750 216 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 OLFM2O95897 454 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 GOT2P00505 430 aaKnown RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 HMBSP08397 361 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 CCDC166P0CW27 439 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 ZNF37AP17032 561 aaPredicted RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 GM2AP17900 193 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 SAT1P21673 171 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 LPOP22079 712 aaPredicted RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 SP100P23497 879 aaPredicted RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 MPSTP25325 297 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 PIK3R1P27986 724 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 CORO1AP31146 461 aaKnown RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 SLC6A4P31645 630 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 ARRB2P32121 409 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 GMPRP36959 345 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 ACVRL1P37023 503 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 AVPR1AP37288 418 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 MRPL19P49406 292 aaKnown RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 ACADVLP49748 655 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 GSK3AP49840 483 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 ZNF140P52738 457 aaPredicted RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 MTTPP55157 894 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 HERVK_113P63132 956 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 MRPS35P82673 323 aaKnown RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 DLG1Q12959 904 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 GRIK2Q13002 908 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 USP4Q13107 963 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 UBAP2LQ14157 1087 aaKnown RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 SQLEQ14534 574 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 RCN1Q15293 331 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 TAF11Q15544 211 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 MUM1Q2TAK8 710 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 LSM12Q3MHD2 195 aaKnown RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 SLC9B1Q4ZJI4 515 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 LYPLAL1Q5VWZ2 237 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 RETSATQ6NUM9 610 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 PRSS55Q6UWB4 352 aaPredicted RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 HACD2Q6Y1H2 254 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 SLC39A5Q6ZMH5 540 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 LRRC74BQ6ZQY2 392 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 CHSY3Q70JA7 882 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 PTAR1Q7Z6K3 402 aaPredicted RBP8.26□□□□□ -1.09
SKA2-203ENST00000578105 MFSD6LQ8IWD5 586 aa8.26□□□□□ -1.09
SKA2-203ENST00000578105 CLYBLQ8N0X4 340 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms