RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 RANBP10Q6VN20 620 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 C3orf62Q6ZUJ4 267 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 Q6ZVU0 165 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 PIP4P1Q86T03 277 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 LINC00523Q86TU6 105 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 PHTF2Q8N3S3 785 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 CHST14Q8NCH0 376 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 ZNF669Q96BR6 464 aaPredicted RBP10.12□□□□□ -0.79
CRLF3-202ENST00000577725 FEM1CQ96JP0 617 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 FCRL3Q96P31 734 aaPredicted RBP10.12□□□□□ -0.79
CRLF3-202ENST00000577725 PPP1R2P1Q96PQ5 205 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 ACBD3Q9H3P7 528 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 BFARQ9NZS9 450 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 SLC17A6Q9P2U8 582 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 DKK4Q9UBT3 224 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 CTNNAL1Q9UBT7 734 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 KCTD3Q9Y597 815 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 MUC22E2RYF6 1773 aaPredicted RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 A0A0U1RQS6 177 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 LOC285095A0A1B0GVY8 99 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 CXorf49A8MYA2 514 aaPredicted RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 UPK3BL1B0FP48 263 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 UPK3BL2E5RIL1 263 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 POC1B-GALNT4F8VUJ3 575 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 ARNTLO00327 626 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 NDST3O95803 873 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SYF2O95926 243 aaKnown RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SLC4A1P02730 911 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 PDHA1P08559 390 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 NUDT17P0C025 328 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 HLA-EP13747 358 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 PGAM1P18669 254 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 NMBRP28336 390 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SULT2A1Q06520 285 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SLC20A2Q08357 652 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SLC1A5Q15758 541 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 PTPRNQ16849 979 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 FNDC3BQ53EP0 1204 aaKnown RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 TTMPQ5BVD1 217 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 STEAP4Q687X5 459 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 DPY19L3Q6ZPD9 716 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 CAMK1DQ8IU85 385 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SYNPOQ8N3V7 929 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 ZNF557Q8N988 423 aaPredicted RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 TERB1Q8NA31 727 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 BLOC1S5Q8TDH9 187 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 LRRC39Q96DD0 335 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 MYO19Q96H55 970 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 ZNF778Q96MU6 729 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 TRIB3Q96RU7 358 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 TDRD1Q9BXT4 1180 aaKnown RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 ZDHHC6Q9H6R6 413 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 FBRSL1Q9HCM7 1045 aaKnown RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SMYD2Q9NRG4 433 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 HAUS2Q9NVX0 235 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 ELOVL2Q9NXB9 296 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SAMD15Q9P1V8 674 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 HECAQ9UBI9 543 aaPredicted RBP10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SLC2A6Q9UGQ3 507 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SOX13Q9UN79 622 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 HS3ST2Q9Y278 367 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SLC27A6Q9Y2P4 619 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 SPO11Q9Y5K1 396 aa10.11□□□□□ -0.79
CRLF3-202ENST00000577725 COL4A2P08572 1712 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 EXOC1LA0A1B0GW35 172 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 TCRBV9S1A1TA0A576 114 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 TBC1D3BA6NDS4 549 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 FOXO6A8MYZ6 492 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 CCL22O00626 93 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 BUD23O43709 281 aaKnown RBP10.1□□□□□ -0.79
CRLF3-202ENST00000577725 UGT1A9O60656 530 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 GSRP00390 522 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 PRLP01236 227 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 FGF1P05230 155 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 DLDP09622 509 aaKnown RBP10.1□□□□□ -0.79
CRLF3-202ENST00000577725 CTPS1P17812 591 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 GCAP28676 217 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 SLC8A1P32418 973 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 PHBP35232 272 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 WASP42768 502 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 ABCG1P45844 678 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 CCNHP51946 323 aaPredicted RBP10.1□□□□□ -0.79
CRLF3-202ENST00000577725 SEC13P55735 322 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 AP1S1P61966 158 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 SNRPD1P62314 119 aaKnown RBP10.1□□□□□ -0.79
CRLF3-202ENST00000577725 SEMG2Q02383 582 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 PPARDQ03181 441 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 CFHR1Q03591 330 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 NSUN2Q08J23 767 aaKnown RBP eCLIP10.1□□□□□ -0.79
CRLF3-202ENST00000577725 CBLBQ13191 982 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 PTPRCAPQ14761 206 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 CRYMQ14894 314 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 SLC14A2Q15849 920 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 QPCTQ16769 361 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 MYLK3Q32MK0 819 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 ANKRD20A4Q4UJ75 823 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 CARD16Q5EG05 197 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 EGFLAMQ63HQ2 1017 aa10.1□□□□□ -0.79
CRLF3-202ENST00000577725 RASSF3Q86WH2 238 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms