RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 MUSKO15146 869 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 TGDSO95455 350 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 GLUD1P00367 558 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ALDOAP04075 364 aaKnown RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 CRHR1P34998 444 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ETFBP38117 255 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 CD86P42081 329 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 CHRNA4P43681 627 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 AQP4P55087 323 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ITKQ08881 620 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 PCSK7Q16549 785 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 C1orf146Q5VVC0 180 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 KYAT3Q6YP21 454 aaKnown RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 Q6ZNB5 142 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 NDUFAF2Q8N183 169 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 MRPL43Q8N983 215 aaKnown RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 ZNF778Q96MU6 729 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ZNF599Q96NL3 588 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 RBBP8Q99708 897 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 TMEM120AQ9BXJ8 343 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 EMILIN2Q9BXX0 1053 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ATXN3LQ9H3M9 355 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 FBXO6Q9NRD1 293 aaPredicted RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 PLA2G4CQ9UP65 541 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 MYOFQ9NZM1 2061 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 TTC24A2A3L6 582 aaPredicted RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 GFRA2O00451 464 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 RELAQ04206 551 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 POU6F1Q14863 301 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 THOC7Q6I9Y2 204 aaKnown RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 CXorf57Q6NSI4 855 aaKnown RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 KDELC2Q7Z4H8 507 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 SETD3Q86TU7 594 aaPredicted RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 METTL25Q8N6Q8 603 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 PPHLN1Q8NEY8 458 aaKnown RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 SPPL3Q8TCT6 385 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 SLC22A17Q8WUG5 538 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 POF1BQ8WVV4 589 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 MRPS31Q92665 395 aaKnown RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 PRR11Q96HE9 360 aaPredicted RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 DHRS1Q96LJ7 313 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 SLC13A1Q9BZW2 595 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 C20orf96Q9NUD7 363 aaPredicted RBP13.85□□□□□ -0.19
RNF43-202ENST00000577625 SLC7A8Q9UHI5 535 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 CROTQ9UKG9 612 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 TCAF1Q9Y4C2 921 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ACTL7AQ9Y615 435 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ATG2AQ2TAZ0 1938 aa13.85□□□□□ -0.19
RNF43-202ENST00000577625 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.84□□□□□ -0.19
RNF43-202ENST00000577625 ILVBLA1L0T0 632 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 CCDC78A2IDD5 438 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 WDR91A4D1P6 747 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 TPP1O14773 563 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 CCL16O15467 120 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 RHOCP08134 193 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 GLDCP23378 1020 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 SPRP35270 261 aaPredicted RBP13.84□□□□□ -0.19
RNF43-202ENST00000577625 CLCN4P51793 760 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 LIMK2P53671 638 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 CSE1LP55060 971 aaKnown RBP13.84□□□□□ -0.19
RNF43-202ENST00000577625 IRX4P78413 519 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 OVGP1Q12889 678 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 ZNF177Q13360 481 aaPredicted RBP13.84□□□□□ -0.19
RNF43-202ENST00000577625 ZNF235Q14590 738 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 MYLK3Q32MK0 819 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 IL31Q6EBC2 164 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 STRA8Q7Z7C7 330 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
RNF43-202ENST00000577625 MARVELD2Q8N4S9 558 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 DDI1Q8WTU0 396 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 ISL2Q96A47 359 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 ITPKCQ96DU7 683 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 AGAP2Q99490 1192 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 C17orf80Q9BSJ5 609 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 MANSC1Q9H8J5 431 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 PLGRKTQ9HBL7 147 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 TLR9Q9NR96 1032 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 NSMCE4AQ9NXX6 385 aa13.84□□□□□ -0.19
RNF43-202ENST00000577625 KIAA1522Q9P206 1035 aaPredicted RBP13.84□□□□□ -0.19
RNF43-202ENST00000577625 A0A1W2PRU2 124 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 CCDC162PA2VCL2 907 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 FCHO1O14526 889 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 GJB3O75712 270 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 PCSK6P29122 969 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 SLC5A2P31639 672 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 STXBP5Q5T5C0 1151 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 ALG1LQ6GMV1 187 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 FAM217AQ8IXS0 508 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 ELMOD1Q8N336 334 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 RBM15BQ8NDT2 890 aaKnown RBP13.83□□□□□ -0.19
RNF43-202ENST00000577625 MCMBPQ9BTE3 642 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 SPON2Q9BUD6 331 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 PRKD2Q9BZL6 878 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.19
RNF43-202ENST00000577625 KCNK13Q9HB14 408 aa13.83□□□□□ -0.19
RNF43-202ENST00000577625 TXNDC9O14530 226 aa13.83□□□□□ -0.2
RNF43-202ENST00000577625 KDELR3O43731 214 aa13.83□□□□□ -0.2
RNF43-202ENST00000577625 PEX1O43933 1283 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms