RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SELENOMQ8WWX9 145 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TSEN34Q9BSV6 310 aaKnown RBP17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 FZD8Q9H461 694 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TPRKBQ9Y3C4 175 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TP73O15350 636 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 JAK1P23458 1154 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 SLC1A2P43004 574 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 SLC16A1P53985 500 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 TRAF3Q13114 568 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 TMEM63BQ5T3F8 832 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 CRTC3Q6UUV7 619 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 MED8Q96G25 268 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 HAPLN2Q9GZV7 340 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 OPTCQ9UBM4 332 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 TEKT2Q9UIF3 430 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 A6NHS1 94 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 GSTM1P09488 218 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 CTPS1P17812 591 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 LILRA4P59901 499 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 KCTD8Q6ZWB6 473 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 PAGE2Q7Z2X7 111 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 CIR1Q86X95 450 aaPredicted RBP17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 PNPT1Q8TCS8 783 aaKnown RBP17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 CNGB3Q9NQW8 809 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 OXSMQ9NWU1 459 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 CDH9Q9ULB4 789 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 SMIM10L2AP0DMW4 78 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 SMIM10L2BP0DMW5 78 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 MSH3P20585 1137 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 EFNA1P20827 205 aaPredicted RBP17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 RPS9P46781 194 aaKnown RBP17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 AARS2Q5JTZ9 985 aaKnown RBP17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 GPRIN3Q6ZVF9 776 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 SLCO6A1Q86UG4 719 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 ARL10Q8N8L6 244 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 ZNF778Q96MU6 729 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 ADGRE3Q9BY15 652 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 GBA3Q9H227 469 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 AGO3Q9H9G7 860 aaKnown RBP17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 AMBNQ9NP70 447 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 ABCC13Q9NSE7 274 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 ARL15Q9NXU5 204 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 POLR3HQ9Y535 204 aaPredicted RBP17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 GMPPBQ9Y5P6 360 aa17.9■□□□□ 0.46
ATPAF1-214ENST00000576409 RAD51BO15315 384 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 ZBTB14O43829 449 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 NOBOXO60393 691 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 DNAJB2P25686 324 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 ENTPD1P49961 510 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 SLC10A2Q12908 348 aaPredicted RBP17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 CBX3Q13185 183 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 CPSF7Q8N684 471 aaKnown RBP17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 DQX1Q8TE96 717 aaKnown RBP17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 CCDC28BQ9BUN5 200 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 ADGRE2Q9UHX3 823 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 ASNA1O43681 348 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 ICAM3P32942 547 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 HUNKP57058 714 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 FAM45BPQ6NSW5 357 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 RNF19BQ6ZMZ0 732 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 ADHFE1Q8IWW8 467 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 OR4K2Q8NGD2 314 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 SCAMP5Q8TAC9 235 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 FAM45AQ8TCE6 357 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 UBASH3BQ8TF42 649 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 LINGO1Q96FE5 620 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 SMPD3Q9NY59 655 aaPredicted RBP17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 C3orf18Q9UK00 162 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 DUSP12Q9UNI6 340 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 A0A1W2PPW3 197 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 MTPNP58546 118 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 CDK18Q07002 472 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 RBM20Q5T481 1227 aaKnown RBP17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 TYW3Q6IPR3 259 aaKnown RBP17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 OR10Q1Q8NGQ4 319 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 BORCS5Q969J3 196 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 CCDC106Q9BWC9 280 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 SH3GLB1Q9Y371 365 aa17.89■□□□□ 0.45
ATPAF1-214ENST00000576409 HNRNPCL2B2RXH8 293 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 PGK1P00558 417 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 PSEN2P49810 448 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 MTTPP55157 894 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 TCEAL1Q15170 157 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 PPP1R3AQ16821 1122 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 ANKRD46Q86W74 232 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 ZHX1-C8orf76Q96EF9 292 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 PCED1BQ96HM7 432 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 PLEKHA8Q96JA3 519 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 NUAK2Q9H093 628 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 XYLT2Q9H1B5 865 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 TPK1Q9H3S4 243 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 TIMMDC1Q9NPL8 285 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 EXD2Q9NVH0 621 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 DNAAF2Q9NVR5 837 aaKnown RBP17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 UBA2Q9UBT2 640 aaPredicted RBP17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 IPPQ9Y573 584 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 NPEPPSL1A6NEC2 478 aa17.88■□□□□ 0.45
ATPAF1-214ENST00000576409 ULK1O75385 1050 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms