RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 GM2AP17900 193 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PTPN3P26045 913 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 HNF1BP35680 557 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 CETN2P41208 172 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PEX5P50542 639 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 SKOR1P84550 965 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 ZNF211Q13398 564 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PTK2BQ14289 1009 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 INPP5AQ14642 412 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PCSK7Q16549 785 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 MEI1Q5TIA1 1274 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PLA2G15Q8NCC3 412 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 NUS1Q96E22 293 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 SCRN2Q96FV2 425 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 QKIQ96PU8 341 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPAIN-216ENST00000575599 MCCC1Q96RQ3 725 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-216ENST00000575599 RBM15Q96T37 977 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PCDH9Q9HC56 1237 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 UCKL1Q9NWZ5 548 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 OR1A2Q9Y585 309 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PCNX2A6NKB5 2137 aa13.27□□□□□ -0.28
RPAIN-216ENST00000575599 TDRD6O60522 2096 aaKnown RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 A0A0J9YYE9 177 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 GOLGA6CA6NDK9 693 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 GOLGA6BA6NDN3 693 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 F5H423 210 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 H3BM21 787 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 H7C0C1 242 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 PIAS2O75928 621 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 TRBC1P01850 177 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 GOLGA6DP0CG33 693 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 NME1P15531 152 aaKnown RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 JUNDP17535 347 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 DGKAP23743 735 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 PMLP29590 882 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 PTPN7P35236 360 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 ETV3P41162 512 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 ATP5OP48047 213 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 YPEL5P62699 121 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 EIF2B5Q13144 721 aaKnown RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 MTM1Q13496 603 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 GALNT3Q14435 633 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 AGERQ15109 404 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 TEX44Q53QW1 395 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 CCDC157Q569K6 752 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 LRRC66Q68CR7 880 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 MACC1Q6ZN28 852 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 KANSL1Q7Z3B3 1105 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 KDELC2Q7Z4H8 507 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 HSD11B1LQ7Z5J1 315 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 PNPLA1Q8N8W4 532 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 IFT43Q96FT9 208 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 IMP4Q96G21 291 aaKnown RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 CNDP2Q96KP4 475 aaKnown RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 COQ10AQ96MF6 247 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 FAM118BQ9BPY3 351 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 C10orf88Q9H8K7 445 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 GLOD4Q9HC38 313 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 GOLGA6AQ9NYA3 693 aa13.27□□□□□ -0.29
RPAIN-216ENST00000575599 KLHL8Q9P2G9 620 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-216ENST00000575599 CAPN8A6NHC0 703 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 HACD1B0YJ81 288 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 TOR1BO14657 336 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 DDX3YO15523 660 aaKnown RBP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 MTSS1O43312 755 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 TJP3O95049 919 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 PRLP01236 227 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 CSF2P04141 144 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 ATXN1LP0C7T5 689 aaKnown RBP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 HTR1BP28222 390 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 HNRNPKP61978 463 aaKnown RBP eCLIP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 WASHC5Q12768 1159 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 PDAP1Q13442 181 aaKnown RBP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 NOMO1Q15155 1222 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 GLRX5Q86SX6 157 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 PHACTR4Q8IZ21 702 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 RBFAQ8N0V3 343 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 SLC25A45Q8N413 288 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 ZNF548Q8NEK5 533 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 SPATA22Q8NHS9 363 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 ACTL9Q8TC94 416 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 HTR3CQ8WXA8 447 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 DTD2Q96FN9 168 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 TEKT5Q96M29 485 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 APOOQ9BUR5 198 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 ADGRE3Q9BY15 652 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 SLC25A51Q9H1U9 297 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 TCEAL2Q9H3H9 227 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 KLF15Q9UIH9 416 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 APOBEC2Q9Y235 224 aaKnown RBP13.26□□□□□ -0.29
RPAIN-216ENST00000575599 EFR3BQ9Y2G0 817 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 PPIL1Q9Y3C6 166 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 SAR1BQ9Y6B6 198 aa13.26□□□□□ -0.29
RPAIN-216ENST00000575599 K7ESM1 405 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 PSMD11O00231 422 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 CACNB4O00305 520 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 TNFSF14O43557 240 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms