RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SUDS3Q9H7L9 328 aaPredicted RBP15.24■□□□□ 0.03
CTNS-209ENST00000574776 NOD2Q9HC29 1040 aa15.24■□□□□ 0.03
CTNS-209ENST00000574776 MRPL47Q9HD33 250 aaKnown RBP15.24■□□□□ 0.03
CTNS-209ENST00000574776 TMEM63CQ9P1W3 806 aa15.24■□□□□ 0.03
CTNS-209ENST00000574776 PCDHGA7Q9Y5G6 932 aa15.24■□□□□ 0.03
CTNS-209ENST00000574776 SCINQ9Y6U3 715 aa15.24■□□□□ 0.03
CTNS-209ENST00000574776 AHCTF1Q8WYP5 2266 aa15.24■□□□□ 0.03
CTNS-209ENST00000574776 A0A1W2PQC6 194 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 PRSS38A1L453 326 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 PDE2AO00408 941 aaPredicted RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 HTRA2O43464 458 aaPredicted RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 MAFKO60675 156 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 FUCA1P04066 466 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 JMJD7P0C870 316 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 MYBL1P10243 752 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 PNLIPP16233 465 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 CR2P20023 1033 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 CCKBRP32239 447 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 ARL4AP40617 200 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 ZFP36L1Q07352 338 aaKnown RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 HLTFQ14527 1009 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTNS-209ENST00000574776 PTPRRQ15256 657 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 TGIF1Q15583 401 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 CNGA3Q16281 694 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 DPYSL2Q16555 572 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 TMCO3Q6UWJ1 677 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 CBARPQ8N350 705 aaPredicted RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 NUS1Q96E22 293 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 NUDCD1Q96RS6 583 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 CCNL2Q96S94 520 aaPredicted RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 BPIFA3Q9BQP9 254 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 ISCUQ9H1K1 167 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 CARS2Q9HA77 564 aaKnown RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 SPATS2LQ9NUQ6 558 aaKnown RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 PISDQ9UG56 409 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 LOXL2Q9Y4K0 774 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 SETXQ7Z333 2677 aaKnown RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 COL6A6A6NMZ7 2263 aa15.23■□□□□ 0.03
CTNS-209ENST00000574776 FLNBO75369 2602 aaKnown RBP15.23■□□□□ 0.03
CTNS-209ENST00000574776 A0A1W2PQ67 120 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 CAPN8A6NHC0 703 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 B4GAT1O43505 415 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 SOCS5O75159 536 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 HEXIM1O94992 359 aaKnown RBP15.22■□□□□ 0.03
CTNS-209ENST00000574776 CPP00450 1065 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 CEACAM5P06731 702 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 RARAP10276 462 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 MYCLP1P12525 358 aaPredicted RBP15.22■□□□□ 0.03
CTNS-209ENST00000574776 VIPR1P32241 457 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 HSPA9P38646 679 aaKnown RBP15.22■□□□□ 0.03
CTNS-209ENST00000574776 ETV3P41162 512 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 MAXP61244 160 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 TRAF2Q12933 501 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 NR1I3Q14994 352 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
CTNS-209ENST00000574776 TXNRD3NBQ6F5E7 133 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 TMPRSS9Q7Z410 1059 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 HSD11B1LQ7Z5J1 315 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 SPRED1Q7Z699 444 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 GPBAR1Q8TDU6 330 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 TRIM11Q96F44 468 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 CSPG4P5Q96PW8 444 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 TEX101Q9BY14 249 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 PHPT1Q9NRX4 125 aaPredicted RBP15.22■□□□□ 0.03
CTNS-209ENST00000574776 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.22■□□□□ 0.03
CTNS-209ENST00000574776 PHTF1Q9UMS5 762 aa15.22■□□□□ 0.03
CTNS-209ENST00000574776 A0A0U1RQS6 177 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 A0A1B0GTH6 734 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 GOLGA6CA6NDK9 693 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 GOLGA6BA6NDN3 693 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 NVLO15381 856 aaKnown RBP15.21■□□□□ 0.03
CTNS-209ENST00000574776 NUDT21O43809 227 aaKnown RBP15.21■□□□□ 0.03
CTNS-209ENST00000574776 FGF1P05230 155 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 GOLGA6DP0CG33 693 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 CCNB1P14635 433 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 ITIH1P19827 911 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 LHCGRP22888 699 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 POLD2P49005 469 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 MAZP56270 477 aaKnown RBP15.21■□□□□ 0.03
CTNS-209ENST00000574776 OR1D5P58170 312 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 B4GALNT1Q00973 533 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 MARC1Q5VT66 337 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 Q6ZVL8 140 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 USP53Q70EK8 1073 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 HEATR4Q86WZ0 1026 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 NRROSQ86YC3 692 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 BBS5Q8N3I7 341 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 KIAA1524Q8TCG1 905 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 ZDHHC1Q8WTX9 485 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 NSMCE1Q8WV22 266 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 PTCD2Q8WV60 388 aaKnown RBP15.21■□□□□ 0.03
CTNS-209ENST00000574776 SCRN2Q96FV2 425 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 BTBD6Q96KE9 485 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 MGME1Q9BQP7 344 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 SEMA6CQ9H3T2 930 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 GOLGA6AQ9NYA3 693 aa15.21■□□□□ 0.03
CTNS-209ENST00000574776 SCN8AQ9UQD0 1980 aa15.2■□□□□ 0.02
CTNS-209ENST00000574776 NPIPB15A6NHN6 443 aaPredicted RBP15.2■□□□□ 0.02
CTNS-209ENST00000574776 PGLSO95336 258 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms