RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TM6SF2Q9BZW4 377 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 LINC00597Q9H2U6 94 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 ACTR5Q9H9F9 607 aaPredicted RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 INTS10Q9NVR2 710 aaKnown RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 VWA7Q9Y334 891 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 PCDHB9Q9Y5E1 797 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 WISP3O95389 354 aaPredicted RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SAT1P21673 171 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SLC26A3P40879 764 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SULT2A1Q06520 285 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 HECTD2Q5U5R9 776 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 OR2AP1Q8NGE2 309 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SMG7Q92540 1137 aaKnown RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 CEP44Q9C0F1 390 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 KCNK13Q9HB14 408 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 TARM1B6A8C7 271 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 NEDD8-MDP1E9PL57 170 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 PABPC1P11940 636 aaKnown RBP28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 TYRP14679 529 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 STC1P52823 247 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 BCL2L1Q07817 233 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 ADAM15Q13444 863 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 EP400NLQ6ZTU2 488 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 FITM2Q8N6M3 262 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 CELF5Q8N6W0 485 aaKnown RBP28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 PDCD6IPQ8WUM4 868 aaKnown RBP28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 KCTD4Q8WVF5 259 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 OLFM1Q99784 485 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 CLDND1Q9NY35 253 aa28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 EVLQ9UI08 416 aaPredicted RBP28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 RUVBL2Q9Y230 463 aaKnown RBP28.45■■■□□ 2.14
CTDNEP1-210ENST00000574322 MYOFQ9NZM1 2061 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 BPTFQ12830 3046 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 DCTN3O75935 186 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 RALBP11234 206 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 ABL2P42684 1182 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 PRKAA2P54646 552 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 SEMA3AQ14563 771 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 FAM45BPQ6NSW5 357 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 TMEM184AQ6ZMB5 413 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 CAMK1DQ8IU85 385 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 RFWD2Q8NHY2 731 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 PPP1R14CQ8TAE6 165 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 ITFG1Q8TB96 612 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 FAM45AQ8TCE6 357 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 PPM1EQ8WY54 764 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 VOPP1Q96AW1 172 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 THOC1Q96FV9 657 aaKnown RBP28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 C20orf27Q9GZN8 174 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 PIDD1Q9HB75 910 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 DZANK1Q9NVP4 752 aa28.44■■■□□ 2.14
CTDNEP1-210ENST00000574322 ANKRD65E5RJM6 399 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 H2AFYO75367 372 aaKnown RBP28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SBK3P0C264 359 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 CTSOP43234 321 aaPredicted RBP28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 KPNA2P52292 529 aaKnown RBP28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SNRPD1P62314 119 aaKnown RBP28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SPRED3Q2MJR0 410 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 LY6G5CQ5SRR4 150 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 ZYG11AQ6WRX3 759 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 LDB1Q86U70 411 aaPredicted RBP28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 CRLF3Q8IUI8 442 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 UBXN10Q96LJ8 280 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SMIM14Q96QK8 99 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 TUBGCP5Q96RT8 1024 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 ATP13A3Q9H7F0 1226 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 EPHB1P54762 984 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 DLG1Q12959 904 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 ZNF460Q14592 562 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SPDYAQ5MJ70 313 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 ZCCHC23Q6ZST2 131 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SREK1Q8WXA9 508 aaKnown RBP28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 ING5Q8WYH8 240 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 NDNQ99608 321 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 OXSMQ9NWU1 459 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SLC25A13Q9UJS0 675 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 FBXO10Q9UK96 956 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 SLC12A4Q9UP95 1085 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 ZNF711Q9Y462 761 aa28.43■■■□□ 2.14
CTDNEP1-210ENST00000574322 STX7O15400 261 aaKnown RBP28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 HMGCLP35914 325 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 SLC1A6P48664 564 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 SUOXP51687 545 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 CBX2Q14781 532 aaPredicted RBP28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 CTC1Q2NKJ3 1217 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 LRRC8EQ6NSJ5 796 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 C22orf39Q6P5X5 142 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 TBC1D1Q86TI0 1168 aaPredicted RBP28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 PLPP6Q8IY26 295 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 FSTL5Q8N475 847 aaPredicted RBP28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 PCDH20Q8N6Y1 951 aaKnown RBP28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 TTC8Q8TAM2 541 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 NXNL1Q96CM4 212 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 SIKE1Q9BRV8 207 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 CPEB1Q9BZB8 566 aaKnown RBP28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 SFXN1Q9H9B4 322 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 POPDC3Q9HBV1 291 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 KCNK4Q9NYG8 393 aa28.42■■■□□ 2.14
CTDNEP1-210ENST00000574322 IL17CQ9P0M4 197 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms