RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TP53I13Q8NBR0 393 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 NUS1Q96E22 293 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 OXNAD1Q96HP4 312 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 MRGPRX2Q96LB1 330 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 TRABDQ9H4I3 376 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 GAREM1Q9H706 876 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 ZFYVE1Q9HBF4 777 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 RAD18Q9NS91 495 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 PKD2L2Q9NZM6 624 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 HACD3Q9P035 362 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 PAK5Q9P286 719 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 CDV3Q9UKY7 258 aaKnown RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 SAR1BQ9Y6B6 198 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 RGSL1A5PLK6 1076 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 E7EVH7 732 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 H0Y8X5 98 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 WNT1P04628 370 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 LHCGRP22888 699 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 HTR1BP28222 390 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 LMAN1P49257 510 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 GDF10P55107 478 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 CLDN2P57739 230 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 NXPH1P58417 271 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC14A1Q13336 389 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 MTM1Q13496 603 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 IRF4Q15306 451 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC1A5Q15758 541 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 HLA-BQ31612 363 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 FAM182AQ5T1J6 154 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 STPG1Q5TH74 334 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 LAYNQ6UX15 382 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 Q6ZSR6 202 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 LINC00523Q86TU6 105 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 TSPAN33Q86UF1 283 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 NRSN1Q8IZ57 195 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 ATL2Q8NHH9 583 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 COG1Q8WTW3 980 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 MAGOHBQ96A72 148 aaKnown RBP12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 DTD2Q96FN9 168 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 MS4A14Q96JA4 679 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 COQ10AQ96MF6 247 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 WDR24Q96S15 920 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 GPR63Q9BZJ6 419 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 CDH19Q9H159 772 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 LRRC40Q9H9A6 602 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 FSCN3Q9NQT6 498 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 RNF14Q9UBS8 474 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 CA5BQ9Y2D0 317 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 SNX11Q9Y5W9 270 aa12.77□□□□□ -0.37
TRAPPC1-206ENST00000573989 TDRD6O60522 2096 aaKnown RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 CABIN1Q9Y6J0 2220 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 POM121BA6NF01 834 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 CACNB4O00305 520 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 RAD51BO15315 384 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 GDF9O60383 454 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 CLDN7O95471 211 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 GAS8O95995 478 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 PCCBP05166 539 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 ZNF883P0CG24 379 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 TSHRP16473 764 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 KELP23276 732 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 CASQ1P31415 396 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 IGFALSP35858 605 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 ETV3P41162 512 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 PAFAH1B1P43034 410 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 CCT8P50990 548 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 STC1P52823 247 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 PFN3P60673 137 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 PTSQ03393 145 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 PDE1CQ14123 709 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 ZNF423Q2M1K9 1284 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 WSCD2Q2TBF2 565 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 UAP1L1Q3KQV9 507 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 SIRPB2Q5JXA9 342 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 ESRP1Q6NXG1 681 aaKnown RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 ZNF765Q7L2R6 523 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 HSD11B1LQ7Z5J1 315 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 NLRP8Q86W28 1048 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 CBARPQ8N350 705 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC25A41Q8N5S1 370 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 OR13H1Q8NG92 308 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 GRK7Q8WTQ7 553 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 BMFQ96LC9 184 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 TBL1YQ9BQ87 522 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 FICDQ9BVA6 458 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 MBNL1Q9NR56 388 aaKnown RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 RXFP3Q9NSD7 469 aa12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 DNAAF2Q9NVR5 837 aaKnown RBP12.76□□□□□ -0.37
TRAPPC1-206ENST00000573989 SPTY2D1-AS1A0A0U1RR47 76 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 H3BM21 787 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 AGTP01019 485 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 ATXN1LP0C7T5 689 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms