RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 KPNA5O15131 536 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 MEFVO15553 781 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 CCNT2O60583 730 aaKnown RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 PCCBP05166 539 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 ITGA2BP08514 1039 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 LRRC32Q14392 662 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 CERS6Q6ZMG9 384 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 NKAPQ8N5F7 415 aaKnown RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 PSKH2Q96QS6 385 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 YIPF2Q9BWQ6 316 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 OSBPL1AQ9BXW6 950 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 ILKAPQ9H0C8 392 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 RETREG1Q9H6L5 497 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 VWA7Q9Y334 891 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 DYRK1BQ9Y463 629 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 KLF8O95600 359 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 ARSAP15289 507 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 VAV1P15498 845 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 NMBRP28336 390 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 CD70P32970 193 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 CLCN4P51793 760 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 SLC10A2Q12908 348 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 DPY19L2P1Q6NXN4 242 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 DPY19L3Q6ZPD9 716 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 TP53INP2Q8IXH6 220 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 APCDD1Q8J025 514 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 ARFGAP1Q8N6T3 406 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 NPWQ8N729 165 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 OSCP1Q8WVF1 389 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 MYCBPQ99417 103 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 FAM126AQ9BYI3 521 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 NEUROG2Q9H2A3 272 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 MYO18AQ92614 2054 aaKnown RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 SKAP2O75563 359 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 GRK3P35626 688 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 HTRA4P83105 476 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 TNK2Q07912 1038 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 SLC1A5Q15758 541 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 INO80DQ53TQ3 878 aaPredicted RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 FAM78AQ5JUQ0 283 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 SPDYCQ5MJ68 293 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 ANKRD54Q6NXT1 300 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 C16orf46Q6P387 395 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 CNSTQ6PJW8 725 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 PACS1Q6VY07 963 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 TPRG1Q6ZUI0 275 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 HTR3DQ70Z44 454 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 GPSM1Q86YR5 675 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 FIBINQ8TAL6 211 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 CXorf40BQ96DE9 158 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 MYRFLQ96LU7 910 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 LRRC37BQ96QE4 947 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 FGFR1OP2Q9NVK5 253 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 BCAP29Q9UHQ4 241 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 SOX13Q9UN79 622 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 ANKRD66B4E2M5 251 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 HHLA1C9JL84 531 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 TM7SF2O76062 418 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 ANP32DO95626 131 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 GLDCP23378 1020 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 HOXA9P31269 272 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 SKIV2L2P42285 1042 aaKnown RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 C21orf59P57076 290 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 KLF1Q13351 362 aaPredicted RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 DUSP6Q16828 381 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 TRNP1Q6NT89 227 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 PRR23CQ6ZRP0 262 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 CLP1Q92989 425 aaKnown RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 RHOJQ9H4E5 214 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 ALG9Q9H6U8 611 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 ZNF711Q9Y462 761 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 ARL5AQ9Y689 179 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 TCRBV7S3A2A0A539 114 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 K7ERQ8 282 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 MAN2B1O00754 1011 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 SLC35G4P0C7Q5 338 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 PKMP14618 531 aaKnown RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 HMGA1P17096 107 aaKnown RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 CACNG1Q06432 222 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 PRKAA1Q13131 559 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 TAF1AQ15573 450 aaPredicted RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 TRAF7Q6Q0C0 670 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 PHYKPLQ8IUZ5 450 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 RAVER1Q8IY67 606 aaKnown RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 VN1R2Q8NFZ6 395 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 OR52K2Q8NGK3 314 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 OR13C4Q8NGS5 318 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 HEXDCQ8WVB3 486 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 AZIN2Q96A70 460 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 PGM2Q96G03 612 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 TMEM30AQ9NV96 361 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 GRHL1Q9NZI5 618 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 OR2AG2A6NM03 316 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 WNT9AO14904 365 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 USP1O94782 785 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 LTA4HP09960 611 aaKnown RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 TFEBP19484 476 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 ABRQ12979 859 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 OLIG2Q13516 323 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms