RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 DCP2Q8IU60 420 aaKnown RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 NAXDQ8IW45 347 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 TMEM145Q8NBT3 493 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 DENND6BQ8NEG7 585 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 LPCAT1Q8NF37 534 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 OR13H1Q8NG92 308 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 ASB12Q8WXK4 309 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 ALG3Q92685 438 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 ECHDC3Q96DC8 303 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 IFT43Q96FT9 208 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 OLFM3Q96PB7 478 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 LENG8Q96PV6 779 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 RBM15Q96T37 977 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMG6-211ENST00000572369 ELF4Q99607 663 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 IL12RB2Q99665 862 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 ADGRE3Q9BY15 652 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 PCDH9Q9HC56 1237 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 GOLGA6AQ9NYA3 693 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 KLHL8Q9P2G9 620 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 ANKMY1Q9P2S6 941 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 B4GALT6Q9UBX8 382 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 CHKBQ9Y259 395 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 FNDC3AQ9Y2H6 1198 aaKnown RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 PPP2R2CQ9Y2T4 447 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 HS3ST3A1Q9Y663 406 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 TDRD6O60522 2096 aaKnown RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 FLNCQ14315 2725 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 PTPRQQ9UMZ3 2332 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 A0A1B0GTQ1 180 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 POM121BA6NF01 834 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 RAD51BO15315 384 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 FLRT2O43155 660 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 SPINT1O43278 529 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 SH3BP5O60239 455 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 RECQL5O94762 991 aaPredicted RBP7.8□□□□□ -1.16
SMG6-211ENST00000572369 PGLSO95336 258 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 PCCBP05166 539 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 PDHA1P08559 390 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 ZNF883P0CG24 379 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 CD59P13987 128 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 PTPN3P26045 913 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 VIPR1P32241 457 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 PEX5P50542 639 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 EIF3EP60228 445 aaKnown RBP7.8□□□□□ -1.16
SMG6-211ENST00000572369 OTUD4Q01804 1114 aaKnown RBP7.8□□□□□ -1.16
SMG6-211ENST00000572369 ADCY2Q08462 1091 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 NIPAL4Q0D2K0 466 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 XRCC4Q13426 336 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 FGL2Q14314 439 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 PRKD1Q15139 912 aaPredicted RBP7.8□□□□□ -1.16
SMG6-211ENST00000572369 NOMO1Q15155 1222 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 IRF4Q15306 451 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 RPS6KA1Q15418 735 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 ZNF423Q2M1K9 1284 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 TEX44Q53QW1 395 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 HS1BP3Q53T59 392 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 ALG1LQ6GMV1 187 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 LIPIQ6XZB0 460 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 KYAT3Q6YP21 454 aaKnown RBP7.8□□□□□ -1.16
SMG6-211ENST00000572369 ABI3BPQ7Z7G0 1075 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 GATAD2AQ86YP4 633 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 CDKL3Q8IVW4 592 aaPredicted RBP7.8□□□□□ -1.16
SMG6-211ENST00000572369 TTC13Q8NBP0 860 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 TRIM58Q8NG06 486 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 ARRDC2Q8TBH0 407 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 ACTL9Q8TC94 416 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 HTR3CQ8WXA8 447 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 VOPP1Q96AW1 172 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 NUS1Q96E22 293 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 NSMCE3Q96MG7 304 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 QKIQ96PU8 341 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMG6-211ENST00000572369 VAT1Q99536 393 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 FAM118BQ9BPY3 351 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 TDRD1Q9BXT4 1180 aaKnown RBP7.8□□□□□ -1.16
SMG6-211ENST00000572369 PRORYQ9H606 182 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 ERVMER34-1Q9H9K5 563 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 GLOD4Q9HC38 313 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 DNAJC28Q9NX36 388 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 DKK4Q9UBT3 224 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 RSPH14Q9UHP6 348 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
SMG6-211ENST00000572369 CACNA1EQ15878 2313 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 DOPEY2Q9Y3R5 2298 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 A0A0J9YYE9 177 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 CFAP69A5D8W1 941 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 NPIPB15A6NHN6 443 aaPredicted RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 C10orf142B7Z368 130 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 B8ZZF3 427 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 F5H423 210 aaPredicted RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 H3BM21 787 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 DDX3YO15523 660 aaKnown RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 KCNN4O15554 427 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 ZSCAN12O43309 604 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 SDC3O75056 442 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 PMPCBO75439 489 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 HEXIM1O94992 359 aaKnown RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 TRBC1P01850 177 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 ALPIP09923 528 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 RBP3P10745 1247 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms