RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TBC1D3Q8IZP1 549 aaPredicted RBP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 AADATQ8N5Z0 425 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 MFSD2AQ8NA29 543 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TTC13Q8NBP0 860 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 PDCD6IPQ8WUM4 868 aaKnown RBP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 UBE2Q2Q8WVN8 375 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 MAML1Q92585 1016 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 MS4A14Q96JA4 679 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 KLHL32Q96NJ5 620 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 QKIQ96PU8 341 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 SEMA3CQ99985 751 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 BRD8Q9H0E9 1235 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 IL17BQ9UHF5 180 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 HACD1B0YJ81 288 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 ZNF185O15231 689 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 KCNN4O15554 427 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 OPA1O60313 960 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 ALPPL2P10696 532 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 ADPRHP54922 357 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 BCL2L1Q07817 233 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 SRSF1Q07955 248 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCDC40-205ENST00000571028 CNTN1Q12860 1018 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 OVGP1Q12889 678 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 PRKD1Q15139 912 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-205ENST00000571028 LRRC73Q5JTD7 316 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 CFAP58Q5T655 872 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 GDPD4Q6W3E5 623 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 CCDC81Q6ZN84 652 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 PID1Q7Z2X4 250 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 IQCHQ86VS3 1027 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 COG1Q8WTW3 980 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 SNRNP27Q8WVK2 155 aaKnown RBP13.39□□□□□ -0.27
CCDC40-205ENST00000571028 PBKQ96KB5 322 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 PSKH2Q96QS6 385 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 NAPGQ99747 312 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-205ENST00000571028 NOD2Q9HC29 1040 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 KLHL8Q9P2G9 620 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-205ENST00000571028 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 NUMA1Q14980 2115 aa13.39□□□□□ -0.27
CCDC40-205ENST00000571028 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 CTAGE9A4FU28 777 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 K7ENP7 123 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 TRIM38O00635 465 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 FFAR2O15552 330 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 PRKCGP05129 697 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 XPAP23025 273 aaPredicted RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 PTPN3P26045 913 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 CASQ1P31415 396 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 DRD3P35462 400 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 NUDT1P36639 197 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 HSPA9P38646 679 aaKnown RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 KLF1Q13351 362 aaPredicted RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 XRCC4Q13426 336 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 INO80CQ6PI98 192 aaPredicted RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 KANSL1Q7Z3B3 1105 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 KDELC2Q7Z4H8 507 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 SPATS2Q86XZ4 545 aaKnown RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 PLPP6Q8IY26 295 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 TAB3Q8N5C8 712 aaPredicted RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 TEX26Q8N6G2 289 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 CNTD1Q8N815 330 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 HTR3CQ8WXA8 447 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 PPP1R16AQ96I34 528 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 NUDCD1Q96RS6 583 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 IL12RB2Q99665 862 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 FERMT1Q9BQL6 677 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 MGME1Q9BQP7 344 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 POLR1EQ9GZS1 481 aaKnown RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 ATP13A3Q9H7F0 1226 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 HAUS2Q9NVX0 235 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
CCDC40-205ENST00000571028 DNPEPQ9ULA0 475 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 SNX12Q9UMY4 172 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 CHD5Q8TDI0 1954 aa13.38□□□□□ -0.27
CCDC40-205ENST00000571028 C16orf96A6NNT2 1141 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 SERPINA4P29622 427 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 MAT2AP31153 395 aaKnown RBP13.37□□□□□ -0.27
CCDC40-205ENST00000571028 CD86P42081 329 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 AP1S1P61966 158 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 PPP2CBP62714 309 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 PPP2CAP67775 309 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 NSUN2Q08J23 767 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCDC40-205ENST00000571028 NIPAL4Q0D2K0 466 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 WASHC5Q12768 1159 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 TEX44Q53QW1 395 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 ZNF805Q5CZA5 627 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 C3orf38Q5JPI3 329 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 ERN2Q76MJ5 926 aaKnown RBP13.37□□□□□ -0.27
CCDC40-205ENST00000571028 PARS2Q7L3T8 475 aaKnown RBP13.37□□□□□ -0.27
CCDC40-205ENST00000571028 TTC7BQ86TV6 843 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 OR4C6Q8NH72 309 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 C16orf45Q96MC5 204 aaPredicted RBP13.37□□□□□ -0.27
CCDC40-205ENST00000571028 NSMCE3Q96MG7 304 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms