RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 LTB4R2Q9NPC1 389 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 PXMP2Q9NR77 195 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 SLC22A11Q9NSA0 550 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CPSF2Q9P2I0 782 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 WDR35Q9P2L0 1181 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 STK17AQ9UEE5 414 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 SERTAD3Q9UJW9 196 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 MTUS1Q9ULD2 1270 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 MRPL11Q9Y3B7 192 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ADAM18Q9Y3Q7 739 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC171Q6TFL3 1326 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 LAMA4Q16363 1823 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RALGAPA2Q2PPJ7 1873 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 MYH7BA7E2Y1 1941 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 MYH6P13533 1939 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CACNA1HO95180 2353 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 FLNBO75369 2602 aaKnown RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 NEDD4P46934 1319 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 FRMPD4Q14CM0 1322 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC187A0A096LP49 1063 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TEX51A0A1B0GUA7 166 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 MYOCOSA0A1B0GUC4 107 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 hCG_1809904A0A1W2PP81 198 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 A0A1W2PPE2 198 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 A0A1W2PR64 198 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 C17orf102A2RUQ5 167 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 C9orf118A6NHY6 69 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 GLOD5A6NK44 160 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 C3orf70A6NLC5 250 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 A8MZ25 164 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 C5orf67F2Z3F1 127 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 MATN2O00339 956 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF213O14771 459 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 PSMA7O14818 248 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 PER2O15055 1255 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 LDLRAD4O15165 306 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TRIAP1O43715 76 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 STAM2O75886 525 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 MT-ND3P03897 115 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 LGALS2P05162 132 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 RB1P06400 928 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 IL9P15248 144 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF8P17098 575 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 UBA1P22314 1058 aaKnown RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 AVPR2P30518 371 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TCF7P36402 384 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 BUD31P41223 144 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 NRIP1P48552 1158 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ALDH3A2P51648 485 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TAS2R50P59544 299 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 HAND2P61296 217 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 MC2RQ01718 297 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 NHLH1Q02575 133 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 UBXN1Q04323 297 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 NIPAL4Q0D2K0 466 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ABHD18Q0P651 414 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 GPM6BQ13491 265 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 DYRK1AQ13627 763 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 HLXQ14774 488 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 PGM5Q15124 567 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 E2F5Q15329 346 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 GSTA3Q16772 222 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 FAM187BQ17R55 369 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 HSDL1Q3SXM5 330 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF628Q5EBL2 1059 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 DNAJC21Q5F1R6 531 aaKnown RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 HERC4Q5GLZ8 1057 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TCEAL5Q5H9L2 206 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 SH2D4BQ5SQS7 431 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 CELF3Q5SZQ8 465 aaKnown RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 METRNLQ641Q3 311 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 GRHL2Q6ISB3 625 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 WDR93Q6P2C0 686 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 MTFR2Q6P444 385 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ACSM6Q6P461 480 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TMEM81Q6P7N7 255 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 SLC2A7Q6PXP3 512 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.881e-8■■■■■ 37.8
CNOT1-221ENST00000569924 PARS2Q7L3T8 475 aaKnown RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 PLPPR4Q7Z2D5 763 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 CLNKQ7Z7G1 428 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF589Q86UQ0 364 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 METTL23Q86XA0 190 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TICAM1Q8IUC6 712 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 SYT12Q8IV01 421 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 LINC00346Q8IVM7 164 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 HSCBQ8IWL3 235 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ADHFE1Q8IWW8 467 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC170Q8IYT3 715 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 MYOCDQ8IZQ8 938 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TMCO5AQ8N6Q1 288 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 TEX9Q8N6V9 391 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 PLD5Q8N7P1 536 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 DBF4BQ8NFT6 615 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 RAB40AQ8WXH6 277 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 ATG4AQ8WYN0 398 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 SEPT8Q92599 483 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 CNOT9Q92600 299 aaKnown RBP3.31□□□□□ -1.88
CNOT1-221ENST00000569924 APBB2Q92870 758 aa3.31□□□□□ -1.88
CNOT1-221ENST00000569924 RSPRY1Q96DX4 576 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms