RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
NUP93-220ENST00000569842 CACNA1IQ9P0X4 2223 aa12.34□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3DA0A087WVF3 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3IA0A087WXS9 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3EA0A087X179 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3KA0A087X1G2 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 MAGEB16A2A368 324 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3FA6NER0 549 aaPredicted RBP12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3LB9A6J9 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 AXIN1O15169 862 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 IGLV3-19P01714 112 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3HP0C7X1 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 ZNF30P17039 623 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 LPOP22079 712 aaPredicted RBP12.33□□□□□ -0.43
NUP93-220ENST00000569842 AVPR2P30518 371 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 HMGCLP35914 325 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3GQ6DHY5 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3CQ6IPX1 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 TBC1D3Q8IZP1 549 aaPredicted RBP12.33□□□□□ -0.43
NUP93-220ENST00000569842 FAM160A2Q8N612 972 aaPredicted RBP12.33□□□□□ -0.43
NUP93-220ENST00000569842 FRMD1Q8N878 549 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 OR4K2Q8NGD2 314 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 OR13C4Q8NGS5 318 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 CXorf40AQ8TE69 158 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 PTCD2Q8WV60 388 aaKnown RBP12.33□□□□□ -0.43
NUP93-220ENST00000569842 CFAP36Q96G28 342 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 C9orf72Q96LT7 481 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 SLC2A6Q9UGQ3 507 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 ZC3H7BQ9UGR2 993 aaKnown RBP12.33□□□□□ -0.43
NUP93-220ENST00000569842 INVSQ9Y283 1065 aa12.33□□□□□ -0.43
NUP93-220ENST00000569842 STX7O15400 261 aaKnown RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 C1SP09871 688 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 NMBRP28336 390 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 ZNF140P52738 457 aaPredicted RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 STC1P52823 247 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 PDE1BQ01064 536 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 LAMB3Q13751 1172 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 TSTD2Q5T7W7 516 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 HSD11B1LQ7Z5J1 315 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 MFSD3Q96ES6 412 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 TOE1Q96GM8 510 aaKnown RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 DNAJC1Q96KC8 554 aaKnown RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 SGK2Q9HBY8 427 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 C11orf16Q9NQ32 467 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 IL17CQ9P0M4 197 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 PKP3Q9Y446 797 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 RPS6KL1Q9Y6S9 549 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 FAM237BA0A1B0GVD1 139 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 H0Y858 1186 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 PGAM1P18669 254 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 OXTRP30559 389 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 HOXA6P31267 233 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 SLMAPQ14BN4 828 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 ACOX1Q15067 660 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 ESRP1Q6NXG1 681 aaKnown RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 RFLNAQ6ZTI6 216 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 NLRP9Q7RTR0 991 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 CBARPQ8N350 705 aaPredicted RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 NAT9Q9BTE0 207 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 MRM3Q9HC36 420 aaKnown RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 PREBQ9HCU5 417 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 WSB2Q9NYS7 404 aaPredicted RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 COQ6Q9Y2Z9 468 aa12.33□□□□□ -0.44
NUP93-220ENST00000569842 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.33□□□□□ -0.44
NUP93-220ENST00000569842 NUMA1Q14980 2115 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 IGHV1OR15-9A0A0B4J2B8 117 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 IGLON5A6NGN9 336 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 CCL22O00626 93 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 POLBP06746 335 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 C6P13671 934 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 CD6P30203 668 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 ETV3P41162 512 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 ANKRD20A4Q4UJ75 823 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 SEL1L3Q68CR1 1132 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 CAPN12Q6ZSI9 719 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 TMEM135Q86UB9 458 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 PALM2Q8IXS6 379 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 AENQ8WTP8 325 aaKnown RBP12.32□□□□□ -0.44
NUP93-220ENST00000569842 STYXQ8WUJ0 223 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 ZNF669Q96BR6 464 aaPredicted RBP12.32□□□□□ -0.44
NUP93-220ENST00000569842 FCRL3Q96P31 734 aaPredicted RBP12.32□□□□□ -0.44
NUP93-220ENST00000569842 KDM4CQ9H3R0 1056 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 FNDC3AQ9Y2H6 1198 aaKnown RBP12.32□□□□□ -0.44
NUP93-220ENST00000569842 LRRC72A6NJI9 287 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 LZTS3O60299 673 aaPredicted RBP12.32□□□□□ -0.44
NUP93-220ENST00000569842 RNGTTO60942 597 aaKnown RBP12.32□□□□□ -0.44
NUP93-220ENST00000569842 SEMA4FO95754 770 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 TDGF1P13385 188 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 FNTBP49356 437 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 KYNUQ16719 465 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 ARMC3Q5W041 872 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 UNC5AQ6ZN44 842 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 Q6ZVL8 140 aa12.32□□□□□ -0.44
NUP93-220ENST00000569842 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms