RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CDH9Q9ULB4 789 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 STON1Q9Y6Q2 735 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 PMF1-BGLAPU3KQ54 211 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 TRBV23OR9-2A0A075B6M9 112 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 TRAV34A0A0B4J273 112 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 PVALEFA0A1B0GWK0 134 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 MBLAC1A4D2B0 266 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 LGALS16A8MUM7 142 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 NRP1O14786 923 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 SSX5O60225 188 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CRTAPO75718 401 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 KLHL18O94889 574 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 GALTP07902 379 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 FHP07954 510 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 UBTFL6P0CB48 400 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 SP100P23497 879 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 ZXDAP98168 799 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ZC2HC1CQ53FD0 456 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 SPDYAQ5MJ70 313 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CACHD1Q5VU97 1274 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 GALNT18Q6P9A2 607 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 MACC1Q6ZN28 852 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 TPRA1Q86W33 373 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CCDC60Q8IWA6 550 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 LRRC52Q8N7C0 313 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 NETO1Q8TDF5 533 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 PMEPA1Q969W9 287 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 HDAC11Q96DB2 347 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 AHCYL2Q96HN2 611 aaKnown RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 RBM4BQ9BQ04 359 aaKnown RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 ARHGAP9Q9BRR9 750 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 RBM4Q9BWF3 364 aaKnown RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 SHCBP1LQ9BZQ2 653 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 TBC1D17Q9HA65 648 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 SLC35D1Q9NTN3 355 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ABHD10Q9NUJ1 306 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 DNAJB4Q9UDY4 337 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ZNF148Q9UQR1 794 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ADGRG1Q9Y653 693 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 DUSP10Q9Y6W6 482 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 LOC285556D6RIA3 1793 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 A4D1N5 150 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 AXIN1O15169 862 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ECDO95905 644 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 ASLP04424 464 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CCNA2P20248 432 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 AVPR2P30518 371 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 PLA2G5P39877 138 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 EIF2DP41214 584 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 ARHGAP25P42331 645 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 HTRA4P83105 476 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 IFI16Q16666 785 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 BMP8AQ7Z5Y6 402 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DAW1Q8N136 415 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ZNF366Q8N895 744 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DTWD2Q8NBA8 298 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ZNF461Q8TAF7 563 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 MED30Q96HR3 178 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 LOXL4Q96JB6 756 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 KCNC2Q96PR1 638 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 MCCC1Q96RQ3 725 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 CGRRF1Q99675 332 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 SPATA2Q9UM82 520 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 SZT2Q5T011 3432 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 MCM3APO60318 1980 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 A0A087X0M5 115 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 A0A1B0GX30 115 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 NOTOA8MTQ0 251 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 INPP4BO15327 924 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 NOL4O94818 638 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ADARP55265 1226 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 NME5P56597 212 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 RAB15P59190 212 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 EIF3EP60228 445 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 DEFB103AP81534 67 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 XIAPP98170 497 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ARHGAP44Q17R89 818 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ATXN7L2Q5T6C5 722 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 OR7E24Q6IFN5 339 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DEGS2Q6QHC5 323 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DNAAF5Q86Y56 855 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 EDEM1Q92611 657 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 SLC22A18Q96BI1 424 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 REXO4Q9GZR2 422 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 SLC2A4RGQ9NR83 387 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 POLE3Q9NRF9 147 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 TAS2R3Q9NYW6 316 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 AJAP1Q9UKB5 411 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 SERTM2A0A1B0GWG4 89 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 GTPBP1O00178 669 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 CDK2AP1O14519 115 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DNAJB5O75953 348 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 TNFRSF6BO95407 300 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 LCA5LO95447 670 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CASP4P49662 377 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CYP2J2P51589 502 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ARSDP51689 593 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 METAP1P53582 386 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CYP4F3Q08477 520 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms