RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 NR2C2P49116 596 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 FNTAP49354 379 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 YPEL5P62699 121 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 DYNLT1P63172 113 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 C2orf54Q08AI8 447 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 INPP5AQ14642 412 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 ACOX1Q15067 660 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 WSCD2Q2TBF2 565 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 RALGPS1Q5JS13 557 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 ARMC12Q5T9G4 340 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 UNQ6494/PRO21346Q6UXR6 183 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 BZW1Q7L1Q6 419 aaKnown RBP14.52□□□□□ -0.09
COMMD4-225ENST00000569245 TEX26Q8N6G2 289 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 SLC35B2Q8TB61 432 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 ACTL9Q8TC94 416 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 P3H4Q92791 437 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 RUNDC3BQ96NL0 473 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 POLR1EQ9GZS1 481 aaKnown RBP14.52□□□□□ -0.09
COMMD4-225ENST00000569245 CAAP1Q9H8G2 361 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 GPR27Q9NS67 375 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 TMEM131Q92545 1883 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 TRPM6Q9BX84 2022 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 CFAP69A5D8W1 941 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 EFCAB8A8MWE9 144 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 TRIM38O00635 465 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 TOR1BO14657 336 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 HTRA2O43464 458 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 RECQL5O94762 991 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 NME1P15531 152 aaKnown RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 PECAM1P16284 738 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 CKMT2P17540 419 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 CES1P23141 567 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 HTR1BP28222 390 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 COILP38432 576 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DAB2P98082 770 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 OTUD4Q01804 1114 aaKnown RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 SLC10A2Q12908 348 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 TRAF2Q12933 501 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 RALGDSQ12967 914 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 NOMO1Q15155 1222 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 TPRG1LQ5T0D9 272 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 FAXCQ5TGI0 409 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DENND2CQ68D51 928 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DHRS13Q6UX07 377 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 LIPIQ6XZB0 460 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DPPA4Q7L190 304 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 CCDC13Q8IYE1 715 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 NDUFAF2Q8N183 169 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 LRRN4CLQ8ND94 238 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 LMX1AQ8TE12 382 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 BTN2A2Q8WVV5 523 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 C1orf54Q8WWF1 131 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 MAML1Q92585 1016 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 MAGOHBQ96A72 148 aaKnown RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 TSGA13Q96PP4 275 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 SLC13A1Q9BZW2 595 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DDX47Q9H0S4 455 aaKnown RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DTLQ9NZJ0 730 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 B4GALT6Q9UBX8 382 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 PHTF1Q9UMS5 762 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DRG1Q9Y295 367 aaKnown RBP14.51□□□□□ -0.09
COMMD4-225ENST00000569245 OR1A2Q9Y585 309 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 RAI2Q9Y5P3 530 aa14.51□□□□□ -0.09
COMMD4-225ENST00000569245 DOCK9Q9BZ29 2069 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 SCAMP1O15126 338 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 LIASO43766 372 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 RFPL3O75679 317 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 PGLSO95336 258 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 JCHAINP01591 159 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 C1SP09871 688 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 CYP2A6P11509 494 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-225ENST00000569245 EPHB1P54762 984 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 DSC2Q02487 901 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 AP1B1Q10567 949 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 EIF2B5Q13144 721 aaKnown RBP14.5□□□□□ -0.09
COMMD4-225ENST00000569245 XRCC4Q13426 336 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 ST3GAL2Q16842 350 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 NPNTQ6UXI9 565 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 MACC1Q6ZN28 852 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 GALNT15Q8N3T1 639 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 NOA1Q8NC60 698 aaKnown RBP14.5□□□□□ -0.09
COMMD4-225ENST00000569245 ZNF548Q8NEK5 533 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-225ENST00000569245 OR4C6Q8NH72 309 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 HDAC11Q96DB2 347 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 OLFM3Q96PB7 478 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 KRT12Q99456 494 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 LGMNQ99538 433 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 NLGN3Q9NZ94 848 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 SAE1Q9UBE0 346 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-225ENST00000569245 SPASTQ9UBP0 616 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 APOBEC3BQ9UH17 382 aaKnown RBP14.5□□□□□ -0.09
COMMD4-225ENST00000569245 PCYOX1Q9UHG3 505 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 KLF15Q9UIH9 416 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 PCDHGA1Q9Y5H4 931 aa14.5□□□□□ -0.09
COMMD4-225ENST00000569245 FAM221BA6H8Z2 402 aa14.49□□□□□ -0.09
COMMD4-225ENST00000569245 KCNK1O00180 336 aa14.49□□□□□ -0.09
COMMD4-225ENST00000569245 AQP9O43315 295 aa14.49□□□□□ -0.09
COMMD4-225ENST00000569245 DKK1O94907 266 aa14.49□□□□□ -0.09
COMMD4-225ENST00000569245 PROS1P07225 676 aa14.49□□□□□ -0.09
COMMD4-225ENST00000569245 CDK4P11802 303 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms