RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 TLE3Q04726 772 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 PAFAH1B3Q15102 231 aaKnown RBP18.61■□□□□ 0.57
CPNE7-209ENST00000568977 SLC18A3Q16572 532 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 ARMC12Q5T9G4 340 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 USP45Q70EL2 814 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 H2AFVQ71UI9 128 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 HSD11B1LQ7Z5J1 315 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 HEATR4Q86WZ0 1026 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 SPACA3Q8IXA5 215 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 TEX26Q8N6G2 289 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 BBC3Q96PG8 261 aaPredicted RBP18.61■□□□□ 0.57
CPNE7-209ENST00000568977 SEMA3CQ99985 751 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 POLR1EQ9GZS1 481 aaKnown RBP18.61■□□□□ 0.57
CPNE7-209ENST00000568977 PRORYQ9H606 182 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 CYP4F12Q9HCS2 524 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 THSD1Q9NS62 852 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 KCTD5Q9NXV2 234 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 MOSPD1Q9UJG1 213 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 IGSF10Q6WRI0 2623 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 PRSS38A1L453 326 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 PDE2AO00408 941 aaPredicted RBP18.6■□□□□ 0.57
CPNE7-209ENST00000568977 NTN3O00634 580 aaPredicted RBP18.6■□□□□ 0.57
CPNE7-209ENST00000568977 ETV3P41162 512 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 TRIM14Q14142 442 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 ARHGEF7Q14155 803 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 PDK2Q15119 407 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 PTPRRQ15256 657 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 ANKRD20A8PQ5CZ79 823 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 SPECC1LQ69YQ0 1117 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 TIGD7Q6NT04 549 aaPredicted RBP18.6■□□□□ 0.57
CPNE7-209ENST00000568977 IGF2-ASQ6U949 168 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 TAF8Q7Z7C8 310 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 TSPAN33Q86UF1 283 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 KCTD6Q8NC69 237 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 GPR156Q8NFN8 814 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 MAML1Q92585 1016 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 FAF2Q96CS3 445 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 SCRN2Q96FV2 425 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 NAF1Q96HR8 494 aaKnown RBP18.6■□□□□ 0.57
CPNE7-209ENST00000568977 FCRL3Q96P31 734 aaPredicted RBP18.6■□□□□ 0.57
CPNE7-209ENST00000568977 DNAJC7Q99615 494 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 TMEM168Q9H0V1 697 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 DEF6Q9H4E7 631 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 PHPT1Q9NRX4 125 aaPredicted RBP18.6■□□□□ 0.57
CPNE7-209ENST00000568977 RAI2Q9Y5P3 530 aa18.6■□□□□ 0.57
CPNE7-209ENST00000568977 PMS2P1A4D2B8 440 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 D6RAR5 112 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 CBFA2T2O43439 604 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 KRT7P08729 469 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 CTPS1P17812 591 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 ITKQ08881 620 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 TSR1Q2NL82 804 aaKnown RBP18.59■□□□□ 0.57
CPNE7-209ENST00000568977 ASTE1Q2TB18 679 aaPredicted RBP18.59■□□□□ 0.57
CPNE7-209ENST00000568977 ALG1LQ6GMV1 187 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 Q6ZVL8 140 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 FAM46DQ8NEK8 389 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 OR6C4Q8NGE1 309 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 PIH1D2Q8WWB5 315 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 TEX101Q9BY14 249 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 LCMT1Q9UIC8 334 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 TTLL3Q9Y4R7 772 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 PCDHGA8Q9Y5G5 932 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 UNC13CQ8NB66 2214 aa18.59■□□□□ 0.57
CPNE7-209ENST00000568977 A0A1W2PQM1 296 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 SSU72P8A0A1W2PR75 194 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 GOLGA6CA6NDK9 693 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 GOLGA6BA6NDN3 693 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 B4DGG1 531 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 MATN3O15232 486 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 FZD6O60353 706 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 NOBOXO60393 691 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 RPLP0P05388 317 aaKnown RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 PDHA1P08559 390 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 GOLGA6DP0CG33 693 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 RBMS1P29558 406 aaKnown RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 MAN1A1P33908 653 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 CDK3Q00526 305 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 DSC2Q02487 901 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 GBE1Q04446 702 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 COL9A2Q14055 689 aaPredicted RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 IFI16Q16666 785 aaKnown RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 ZFYVE27Q5T4F4 411 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 LRRC66Q68CR7 880 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 RAET1GQ6H3X3 334 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 MAP7D3Q8IWC1 876 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 SFTPA2Q8IWL1 248 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 CBARPQ8N350 705 aaPredicted RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 PQLC3Q8N755 202 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 OR8K1Q8NGG5 319 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 CCL4L1Q8NHW4 92 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 WDR36Q8NI36 951 aaKnown RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 FATE1Q969F0 183 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 PRR11Q96HE9 360 aaPredicted RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 GFM1Q96RP9 751 aaKnown RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 SUDS3Q9H7L9 328 aaPredicted RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 CARS2Q9HA77 564 aaKnown RBP18.58■□□□□ 0.56
CPNE7-209ENST00000568977 GOLGA6AQ9NYA3 693 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 PPIL1Q9Y3C6 166 aa18.58■□□□□ 0.56
CPNE7-209ENST00000568977 CCDC187A0A096LP49 1063 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms