RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 PGLSO95336 258 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 RPLP0P05388 317 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 HSPA9P38646 679 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 LSSP48449 732 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 POLD2P49005 469 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 PDX1P52945 283 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 KIAA1024LP59773 190 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 GBE1Q04446 702 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 TLE3Q04726 772 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 MESDQ14696 234 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 ANKRD20A8PQ5CZ79 823 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 HEATR4Q86WZ0 1026 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 TPCN2Q8NHX9 752 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 NAT6Q93015 286 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 FCRL3Q96P31 734 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 RBM15Q96T37 977 aaKnown RBP eCLIP12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 CHP1Q99653 195 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 FOXP3Q9BZS1 431 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 DPEP2Q9H4A9 486 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 DEF6Q9H4E7 631 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 CARS2Q9HA77 564 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 EPB41L5Q9HCM4 733 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 RBM22Q9NW64 420 aaKnown RBP eCLIP12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■■■□□ 17
GTF3C1-208ENST00000567843 DGKBQ9Y6T7 804 aa12.23□□□□□ -0.45
GTF3C1-208ENST00000567843 SMG1Q96Q15 3661 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 SHROOM3Q8TF72 1996 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 LOC400499M0QZD8 3231 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 A0A1W2PQM1 296 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 AKR1B10O60218 316 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 FUCA1P04066 466 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 PRB1P04280 392 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 TPM3P06753 285 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 H2AFZP0C0S5 128 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 CYP2A6P11509 494 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 TNNT1P13805 278 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 HGFP14210 728 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 KELP23276 732 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 RBMS1P29558 406 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 TRIM23P36406 574 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 GARSP41250 739 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 GNPDA1P46926 289 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 CXADRP78310 365 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 GALNT2Q10471 571 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 ARHGEF7Q14155 803 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 RAET1GQ6H3X3 334 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 H2AFVQ71UI9 128 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 TRIM74Q86UV6 250 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 PQLC3Q8N755 202 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 OR8K1Q8NGG5 319 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 FAM71BQ8TC56 605 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 PIH1D2Q8WWB5 315 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 RAPGEF5Q92565 580 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 SCAMP4Q969E2 229 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 IQCDQ96DY2 449 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 DTD2Q96FN9 168 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 ZNF578Q96N58 590 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 GFM1Q96RP9 751 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 PRORYQ9H606 182 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 ASCL3Q9NQ33 180 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 SPATS2LQ9NUQ6 558 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 RCOR3Q9P2K3 495 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 ATXN7L1Q9ULK2 861 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 CHKBQ9Y259 395 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 TMEM98Q9Y2Y6 226 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 PLEKHM1Q9Y4G2 1056 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 BPTFQ12830 3046 aa12.22□□□□□ -0.45
GTF3C1-208ENST00000567843 AHCTF1Q8WYP5 2266 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 PRSS38A1L453 326 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 MATN3O15232 486 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 KLK10O43240 276 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 NOBOXO60393 691 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 TNFSF15O95150 251 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 HLA-DQB2P05538 268 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 CEACAM5P06731 702 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 MYCLP1P12525 358 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 AK4P27144 223 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 HNRNPH3P31942 346 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 GPR1P46091 355 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 EPHB1P54762 984 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 MAZP56270 477 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 NIPAL4Q0D2K0 466 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 PAFAH1B3Q15102 231 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 SLC18A3Q16572 532 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 ASTE1Q2TB18 679 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 LRRC66Q68CR7 880 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 LVRNQ6Q4G3 990 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 USP45Q70EL2 814 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 B4GALNT4Q76KP1 1039 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 MARK2Q7KZI7 788 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 LSMEM2Q8N112 164 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 TEX26Q8N6G2 289 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 CCNYQ8ND76 341 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms