RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TSGA13Q96PP4 275 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 DEPDC7Q96QD5 511 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 RBM15Q96T37 977 aaKnown RBP eCLIP4.8□□□□□ -1.64
CLK3-219ENST00000567805 ANP32EQ9BTT0 268 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PACSIN1Q9BY11 444 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 POLR1EQ9GZS1 481 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 CLPBQ9H078 707 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ABCG4Q9H172 646 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 TCEAL2Q9H3H9 227 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 CAAP1Q9H8G2 361 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 NHEJ1Q9H9Q4 299 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 NOD2Q9HC29 1040 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 NT5MQ9NPB1 228 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 B4GALT6Q9UBX8 382 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 KLQ9UEF7 1012 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 AMACRQ9UHK6 382 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 DOLKQ9UPQ8 538 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 RAXQ9Y2V3 346 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PPIL1Q9Y3C6 166 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 OR1A2Q9Y585 309 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PCDHGC4Q9Y5F7 938 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 AK5Q9Y6K8 562 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 DGKBQ9Y6T7 804 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 SCN8AQ9UQD0 1980 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 KNTC1P50748 2209 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ASXL3Q9C0F0 2248 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ARHGEF17Q96PE2 2063 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 PKD1L2Q7Z442 2459 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 A0A087WV48 116 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 CPED1A4D0V7 1026 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TMEM202A6NGA9 273 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 NPIPB15A6NHN6 443 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 A8MX80 341 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 AKR1B15C9JRZ8 316 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 PDE2AO00408 941 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 MATN3O15232 486 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 YY2O15391 372 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 FZD6O60353 706 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 BRINP1O60477 761 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TCEA3O75764 348 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 MTA2O94776 668 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 HEXIM1O94992 359 aaKnown RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 TNFP01375 233 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 MYCLP1P12525 358 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 KRT10P13645 584 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 CCNB1P14635 433 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 ZNF30P17039 623 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 GM2AP17900 193 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TGM2P21980 687 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 CA4P22748 312 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 LHCGRP22888 699 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 KDELR1P24390 212 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TEAD1P28347 426 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TAS2R40P59535 323 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 GBE1Q04446 702 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 DPTQ07507 201 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 ITKQ08881 620 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TRAF2Q12933 501 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 C1orf61Q13536 156 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 MESDQ14696 234 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 CNGA3Q16281 694 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 ZFYVE27Q5T4F4 411 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 LRRC38Q5VT99 294 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 PNCKQ6P2M8 343 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 SARM1Q6SZW1 724 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 EFL1Q7Z2Z2 1120 aaKnown RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 RD3Q7Z3Z2 195 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 CPNE8Q86YQ8 564 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 SLC35F3Q8IY50 421 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 RAVER1Q8IY67 606 aaKnown RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 CBARPQ8N350 705 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 PQLC3Q8N755 202 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 ARL10Q8N8L6 244 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 RNF214Q8ND24 703 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 OR6C4Q8NGE1 309 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 OR56A4Q8NGH8 313 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 SLC35G2Q8TBE7 412 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 MAPK15Q8TD08 544 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TSACCQ96A04 125 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 FUBP1Q96AE4 644 aaKnown RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 NUS1Q96E22 293 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 DTD2Q96FN9 168 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 SCRN2Q96FV2 425 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 PDXPQ96GD0 296 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 ZNF830Q96NB3 372 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 RNF157Q96PX1 679 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 MCCC1Q96RQ3 725 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 CHP1Q99653 195 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 SEMA3CQ99985 751 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 CCDC3Q9BQI4 270 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 WDR26Q9H7D7 661 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 PHPT1Q9NRX4 125 aaPredicted RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 RBM22Q9NW64 420 aaKnown RBP eCLIP4.79□□□□□ -1.64
CLK3-219ENST00000567805 DTLQ9NZJ0 730 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 TSR3Q9UJK0 312 aaKnown RBP4.79□□□□□ -1.64
CLK3-219ENST00000567805 DNPEPQ9ULA0 475 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 INTUQ9ULD6 942 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 PADI4Q9UM07 663 aa4.79□□□□□ -1.64
CLK3-219ENST00000567805 RAI2Q9Y5P3 530 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms