RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 FBXO5Q9UKT4 447 aa17.71■□□□□ 0.43
HERC2-208ENST00000566635 PHTF1Q9UMS5 762 aa17.71■□□□□ 0.43
HERC2-208ENST00000566635 FAM47DPA6NHR8 397 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 PRPF4O43172 522 aaKnown RBP eCLIP17.71■□□□□ 0.42
HERC2-208ENST00000566635 TIMM44O43615 452 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 RPA3P35244 121 aaPredicted RBP17.71■□□□□ 0.42
HERC2-208ENST00000566635 GRIA2P42262 883 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 IL12RB1P42701 662 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 GNGT1P63211 74 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 CDKN3Q16667 212 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 EGFLAMQ63HQ2 1017 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 SERPINA13PQ6UXR4 307 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 CMC1Q7Z7K0 106 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 STK40Q8N2I9 435 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 BANPQ8N9N5 519 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 ACOX2Q99424 681 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 C12orf65Q9H3J6 166 aaKnown RBP17.71■□□□□ 0.42
HERC2-208ENST00000566635 CAB39LQ9H9S4 337 aa17.71■□□□□ 0.42
HERC2-208ENST00000566635 STX7O15400 261 aaKnown RBP17.7■□□□□ 0.42
HERC2-208ENST00000566635 CLDN7O95471 211 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 APODP05090 189 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 GMPRP36959 345 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 CCNFP41002 786 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 PDE1BQ01064 536 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 SLC18A2Q05940 514 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 HNRNPA1L2Q32P51 320 aaKnown RBP17.7■□□□□ 0.42
HERC2-208ENST00000566635 CILP2Q8IUL8 1156 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 CALML6Q8TD86 181 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 APOPT1Q96IL0 206 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 TMEM245Q9H330 911 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 RHOJQ9H4E5 214 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 CACNA2D2Q9NY47 1150 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 IL17CQ9P0M4 197 aa17.7■□□□□ 0.42
HERC2-208ENST00000566635 ZNF106Q9H2Y7 1883 aaKnown RBP17.7■□□□□ 0.42
HERC2-208ENST00000566635 HAUS5O94927 633 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 TOP3BO95985 862 aaKnown RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 PSMA3P25788 255 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 HMGCLP35914 325 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 TERF2Q15554 542 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 C9orf64Q5T6V5 341 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 TXNDC11Q6PKC3 985 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 TIFABQ6ZNK6 161 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 KDM1BQ8NB78 822 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 OR4L1Q8NH43 312 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 UCMAQ8WVF2 138 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 EZH1Q92800 747 aaPredicted RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 ZFYVE1Q9HBF4 777 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 SSU72Q9NP77 194 aaKnown RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 CATSPERZQ9NTU4 200 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 THAP10Q9P2Z0 257 aaPredicted RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 LIMD1Q9UGP4 676 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 SARDHQ9UL12 918 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 SMG5Q9UPR3 1016 aaKnown RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 EDDM13A0A1B0GTR0 161 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 CD3EAPO15446 510 aaKnown RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 LHCGRP22888 699 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 CD151P48509 253 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 GALK1P51570 392 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 METAP1P53582 386 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 PGGT1BP53609 377 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 UGP2Q16851 508 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 CNSTQ6PJW8 725 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 AFTPHQ6ULP2 937 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 CRTC1Q6UUV9 634 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 USP45Q70EL2 814 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 SCRN2Q96FV2 425 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 GUCD1Q96NT3 240 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 MCCC1Q96RQ3 725 aaPredicted RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 KCNK12Q9HB15 430 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 SNX15Q9NRS6 342 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 INTS9Q9NV88 658 aaKnown RBP17.69■□□□□ 0.42
HERC2-208ENST00000566635 PPIL1Q9Y3C6 166 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 PKP3Q9Y446 797 aa17.69■□□□□ 0.42
HERC2-208ENST00000566635 GPR39O43194 453 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 FOSL2P15408 326 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 MC4RP32245 332 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 PEX6Q13608 980 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 LRRC66Q68CR7 880 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 CDHR3Q6ZTQ4 885 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 KIAA0408Q6ZU52 694 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 LYSMD1Q96S90 227 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 GPR22Q99680 433 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 P2RY13Q9BPV8 354 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 NKIRAS1Q9NYS0 192 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 B4GALT6Q9UBX8 382 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 TSPAN11A1L157 253 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SHOX2O60902 331 aaPredicted RBP17.68■□□□□ 0.42
HERC2-208ENST00000566635 ASGR2P07307 311 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SAT1P21673 171 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 FOXN2P32314 431 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 CTHP32929 405 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 LEPRP48357 1165 aaKnown RBP17.68■□□□□ 0.42
HERC2-208ENST00000566635 CDKN1CP49918 316 aaPredicted RBP17.68■□□□□ 0.42
HERC2-208ENST00000566635 SERPINB8P50452 374 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 NEK3P51956 506 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SEC13P55735 322 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 PDE1CQ14123 709 aaPredicted RBP17.68■□□□□ 0.42
HERC2-208ENST00000566635 PPM1JQ5JR12 505 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms