RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ATXN3P54252 364 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 OAZ1P54368 228 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ADARP55265 1226 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 YWHAZP63104 245 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ASIC1P78348 528 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 E2F1Q01094 437 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 DMWDQ09019 674 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 OLIG2Q13516 323 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 DNASE1L3Q13609 305 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 KRT33BQ14525 404 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 DRAP1Q14919 205 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 RABEP1Q15276 862 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 HIST2H2ACQ16777 129 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ME3Q16798 604 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 IFI44LQ53G44 452 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 RARS2Q5T160 578 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 LCTLQ6UWM7 567 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 CCDC73Q6ZRK6 1079 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 SEPT14Q6ZU15 432 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TOM1L2Q6ZVM7 507 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TAOK1Q7L7X3 1001 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 PRSS45Q7RTY3 260 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TMPRSS9Q7Z410 1059 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM124AQ86V42 546 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 CEP57Q86XR8 500 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 GPR135Q8IZ08 494 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 CLYBLQ8N0X4 340 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 FBXO39Q8N4B4 442 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 KLHL36Q8N4N3 616 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 B3GALNT2Q8NCR0 500 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ADPRHL1Q8NDY3 354 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC13A3Q8WWT9 602 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 SOCS4Q8WXH5 440 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 CTNNBL1Q8WYA6 563 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 MOAP1Q96BY2 351 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 CFAP53Q96M91 514 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ADAD1Q96M93 576 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 PRR25Q96S07 402 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 SIN3AQ96ST3 1273 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 HNRNPABQ99729 332 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ABHD14AQ9BUJ0 271 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 KATNB1Q9BVA0 655 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 IFT27Q9BW83 186 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF341Q9BYN7 854 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TKTL2Q9H0I9 626 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 DNAJC18Q9H819 358 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TRIM36Q9NQ86 728 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 OLAHQ9NV23 265 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM248Q9NWD8 314 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 COMMD8Q9NX08 183 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 GDE1Q9NZC3 331 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 NTMQ9P121 344 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ANKFY1Q9P2R3 1169 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ADAM29Q9UKF5 820 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 FBXW2Q9UKT8 454 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 CDH7Q9ULB5 785 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF148Q9UQR1 794 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 REXO2Q9Y3B8 237 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 MAU2Q9Y6X3 613 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ATAD2BQ9ULI0 1458 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF536O15090 1300 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM237AA0A1B0GTK4 181 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A1B0GVM2 712 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A1W2PR77 199 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A1W2PS29 197 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 C1orf226A1L170 272 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 MATN2O00339 956 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 MCF2LO15068 1137 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 CLIC2O15247 247 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SEC14L5O43304 696 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TMPRSS11DO60235 418 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 MFAP3LO75121 409 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 AKR7A3O95154 331 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 KCNK5O95279 499 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TRIM16O95361 564 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 APBB3O95704 486 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 C1RP00736 705 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SERPINC1P01008 464 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TFP02787 698 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 RLN1P04808 185 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 VIMP08670 466 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SBK2P0C263 348 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 CCDC192P0DO97 292 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 PDHBP11177 359 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 NCF1P14598 390 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF182P17025 639 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HOXB9P17482 250 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ITIH1P19827 911 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 GATA3P23771 443 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 NDUFS1P28331 727 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HOXA13P31271 388 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SOAT1P35610 550 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HNMTP50135 292 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 BLKP51451 505 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ARFIP1P53367 373 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SNU13P55769 128 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TPTEP56180 551 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 RAC3P60763 192 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms