RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	ERN2	Q76MJ5	926 aa	Known RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	SLFN11	Q7Z7L1	901 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	HORMAD1	Q86X24	394 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	SLC25A45	Q8N413	288 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	PGBD5	Q8N414	524 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	GOLM1	Q8NBJ4	401 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	OR2AP1	Q8NGE2	309 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	GIMAP7	Q8NHV1	300 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	FAM71B	Q8TC56	605 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	FNIP1	Q8TF40	1166 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	ISG20	Q96AZ6	181 aa	Known RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	ZNF653	Q96CK0	615 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	VCPIP1	Q96JH7	1222 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	SERAC1	Q96JX3	654 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	RHOV	Q96L33	236 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	SMIM14	Q96QK8	99 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	OMD	Q99983	421 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	HDAC8	Q9BY41	377 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	XPO4	Q9C0E2	1151 aa	Known RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	SLC39A8	Q9C0K1	460 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	THAP2	Q9H0W7	228 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	MAGEH1	Q9H213	219 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	TCEAL2	Q9H3H9	227 aa	Predicted RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	ZDHHC6	Q9H6R6	413 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	PREB	Q9HCU5	417 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	SSU72	Q9NP77	194 aa	Known RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	CWC15	Q9P013	229 aa	Known RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	IFNK	Q9P0W0	207 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	CNOT8	Q9UFF9	292 aa	Known RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	SLC12A6	Q9UHW9	1150 aa		6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376	FASN	P49327	2511 aa	Known RBP	6.54	□□□□□ -1.36
TCF4-233	ENST00000566376		A0A1W2PNU3	283 aa	Predicted RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	FAM149A	A5PLN7	773 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	C16orf96	A6NNT2	1141 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	C1QTNF3-AMACR	E9PGA6	284 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	GOLGA6L22	H0YM25	854 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	TLR4	O00206	839 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	FANCG	O15287	622 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	SLC31A1	O15431	190 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	AP1G1	O43747	822 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	CREB3	O43889	395 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	PRAMEF11	O60813	436 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	RAMP2	O60895	175 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	ALX3	O95076	343 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	TIAF1	O95411	115 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	FTL	P02792	175 aa	Predicted RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	PRKCG	P05129	697 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	UGT2B4	P06133	528 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	MYF5	P13349	255 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	ERCC2	P18074	760 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	CR2	P20023	1033 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	CDK11B	P21127	795 aa	Known RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	PSMA2	P25787	234 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	EPHB2	P29323	1055 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	HNRNPH3	P31942	346 aa	Known RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	NEK3	P51956	506 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	OXCT1	P55809	520 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	TAS2R40	P59535	323 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	KRT83	P78385	493 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	EIF2B5	Q13144	721 aa	Known RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	COL9A2	Q14055	689 aa	Predicted RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	MPP2	Q14168	576 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	FZD2	Q14332	565 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	E2F5	Q15329	346 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	DPYSL2	Q16555	572 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	ATP13A4	Q4VNC1	1196 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	FBLN7	Q53RD9	439 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	CARD16	Q5EG05	197 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	RWDD4	Q6NW29	188 aa	Known RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	LRRC31	Q6UY01	552 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	KYAT3	Q6YP21	454 aa	Known RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	RBFA	Q8N0V3	343 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	NIPA2	Q8N8Q9	360 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	MFSD2A	Q8NA29	543 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	MSANTD4	Q8NCY6	345 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	STK35	Q8TDR2	534 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	ECHDC3	Q96DC8	303 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	KLHL32	Q96NJ5	620 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	HEPH	Q9BQS7	1158 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	MBNL1	Q9NR56	388 aa	Known RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	SEPT11	Q9NVA2	429 aa	Known RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	HECA	Q9UBI9	543 aa	Predicted RBP	6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	PCSK1N	Q9UHG2	260 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	COQ6	Q9Y2Z9	468 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	MSRB2	Q9Y3D2	182 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	SPTB	P11277	2137 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	NUP210L	Q5VU65	1888 aa		6.53	□□□□□ -1.36
TCF4-233	ENST00000566376	PIEZO2	Q9H5I5	2752 aa		6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	COL6A6	A6NMZ7	2263 aa		6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	TBC1D3D	A0A087WVF3	549 aa		6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	TBC1D3I	A0A087WXS9	549 aa		6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	TBC1D3E	A0A087X179	549 aa		6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	TBC1D3K	A0A087X1G2	549 aa		6.52	□□□□□ -1.37
TCF4-233	ENST00000566376		A0A0U1RQS6	177 aa		6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	TBC1D3F	A6NER0	549 aa	Predicted RBP	6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	SRRM3	A6NNA2	597 aa	Predicted RBP	6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.52	□□□□□ -1.37
TCF4-233	ENST00000566376	TBC1D3L	B9A6J9	549 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms