RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 A0A1W2PQM1 296 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 PRSS38A1L453 326 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 NPIPB15A6NHN6 443 aaPredicted RBP18.33■□□□□ 0.52
USB1-213ENST00000566292 NOBOXO60393 691 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 PGLSO95336 258 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 CASP14P31944 242 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 ETV3P41162 512 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 SSR1P43307 286 aaKnown RBP18.33■□□□□ 0.52
USB1-213ENST00000566292 CCL7P80098 99 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 DPYSL3Q14195 570 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 DENND2CQ68D51 928 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 NCBP2-AS2Q69YL0 99 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 OGFOD3Q6PK18 319 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 B3GNT8Q7Z7M8 397 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 TSPAN33Q86UF1 283 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 NSMCE1Q8WV22 266 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 DTD2Q96FN9 168 aa18.33■□□□□ 0.52
USB1-213ENST00000566292 ZFC3H1O60293 1989 aaKnown RBP18.33■□□□□ 0.52
USB1-213ENST00000566292 CCDC187A0A096LP49 1063 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 A0A0U1RQS6 177 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 MAP3K6O95382 1288 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 FUCA1P04066 466 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 RPLP0P05388 317 aaKnown RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 PDHA1P08559 390 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 CYP2A6P11509 494 aaPredicted RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 MYCLP1P12525 358 aaPredicted RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 RBMS1P29558 406 aaKnown RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 GJC1P36383 396 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 GARSP41250 739 aaKnown RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 CXADRP78310 365 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 SKOR1P84550 965 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 GALNT2Q10471 571 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 IHHQ14623 411 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 PAFAH1B3Q15102 231 aaKnown RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 HADHQ16836 314 aaKnown RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 ARMC12Q5T9G4 340 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 FOXR1Q6PIV2 292 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 HEATR4Q86WZ0 1026 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 LRRC49Q8IUZ0 686 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 FAM46DQ8NEK8 389 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 WDR36Q8NI36 951 aaKnown RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 PIH1D2Q8WWB5 315 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 KCNE4Q8WWG9 221 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 SCRN2Q96FV2 425 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 SMIM14Q96QK8 99 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 GFM1Q96RP9 751 aaKnown RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 MCCC1Q96RQ3 725 aaPredicted RBP18.32■□□□□ 0.52
USB1-213ENST00000566292 PACSIN1Q9BY11 444 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 TEX101Q9BY14 249 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 MOSPD1Q9UJG1 213 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 PPIL1Q9Y3C6 166 aa18.32■□□□□ 0.52
USB1-213ENST00000566292 CDRT15L2A8MXV6 281 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 D6RAR5 112 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 PSMD11O00231 422 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 FZD6O60353 706 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 PROSCO94903 275 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 CTPS1P17812 591 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 HNRNPH3P31942 346 aaKnown RBP18.31■□□□□ 0.52
USB1-213ENST00000566292 TAS2R40P59535 323 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 ANKRD20A8PQ5CZ79 823 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 RFLNAQ6ZTI6 216 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 Q6ZVL8 140 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 GPR155Q7Z3F1 870 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 OR6C4Q8NGE1 309 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 PTCD2Q8WV60 388 aaKnown RBP18.31■□□□□ 0.52
USB1-213ENST00000566292 MAML1Q92585 1016 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 LIN37Q96GY3 246 aaPredicted RBP18.31■□□□□ 0.52
USB1-213ENST00000566292 SEMA3CQ99985 751 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 FRMD8Q9BZ67 464 aaPredicted RBP18.31■□□□□ 0.52
USB1-213ENST00000566292 FOXP3Q9BZS1 431 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 XPO4Q9C0E2 1151 aaKnown RBP18.31■□□□□ 0.52
USB1-213ENST00000566292 LRRN3Q9H3W5 708 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 PHPT1Q9NRX4 125 aaPredicted RBP18.31■□□□□ 0.52
USB1-213ENST00000566292 KCTD5Q9NXV2 234 aa18.31■□□□□ 0.52
USB1-213ENST00000566292 B4DGG1 531 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 PDE2AO00408 941 aaPredicted RBP18.3■□□□□ 0.52
USB1-213ENST00000566292 ATXN7O15265 892 aaPredicted RBP18.3■□□□□ 0.52
USB1-213ENST00000566292 KALRNO60229 2985 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 CEACAM5P06731 702 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 GLB1P16278 677 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 NFKBIAP25963 317 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 CDK3Q00526 305 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 HLTFQ14527 1009 aaKnown RBP eCLIP18.3■□□□□ 0.52
USB1-213ENST00000566292 ZSCAN23Q3MJ62 389 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 C14orf28Q4W4Y0 310 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 CERCAMQ5T4B2 595 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 SPECC1LQ69YQ0 1117 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 ALG1LQ6GMV1 187 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 TECPR1Q7Z6L1 1165 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 CLEC14AQ86T13 490 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 NRROSQ86YC3 692 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 CCNJLQ8IV13 435 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 GPBAR1Q8TDU6 330 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 LRRN4Q8WUT4 740 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 ZNF670Q9BS34 389 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 CARS2Q9HA77 564 aaKnown RBP18.3■□□□□ 0.52
USB1-213ENST00000566292 CPNE5Q9HCH3 593 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 EPB41L5Q9HCM4 733 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 CTTNBP2NLQ9P2B4 639 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 UVRAGQ9P2Y5 699 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms