RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PLA2G15Q8NCC3 412 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 GPBAR1Q8TDU6 330 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 PIH1D2Q8WWB5 315 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 TMEM159Q96B96 161 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 DTD2Q96FN9 168 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.2■□□□□ 0.02
CMTM3-212ENST00000566121 WDR26Q9H7D7 661 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 RPL26L1Q9UNX3 145 aaKnown RBP15.2■□□□□ 0.02
CMTM3-212ENST00000566121 GPR34Q9UPC5 381 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 DOLKQ9UPQ8 538 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 OR1A2Q9Y585 309 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 PCDHGA7Q9Y5G6 932 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 UNC13CQ8NB66 2214 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 CCDC187A0A096LP49 1063 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 A0A1W2PNU3 283 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-212ENST00000566121 SSU72P8A0A1W2PR75 194 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 NUDT21O43809 227 aaKnown RBP15.19■□□□□ 0.02
CMTM3-212ENST00000566121 PROSCO94903 275 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 KRT7P08729 469 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 H2AFZP0C0S5 128 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 HOXB3P14651 431 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-212ENST00000566121 ZNF30P17039 623 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 RBMS1P29558 406 aaKnown RBP15.19■□□□□ 0.02
CMTM3-212ENST00000566121 GARSP41250 739 aaKnown RBP15.19■□□□□ 0.02
CMTM3-212ENST00000566121 SQSTM1Q13501 440 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 NR1D2Q14995 579 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 CNGA3Q16281 694 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 SLC18A3Q16572 532 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 SMTNL2Q2TAL5 461 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 CCDC122Q5T0U0 273 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 TIGD7Q6NT04 549 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-212ENST00000566121 H2AFVQ71UI9 128 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 TECPR1Q7Z6L1 1165 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 ARL14Q8N4G2 192 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 OR1E3Q8WZA6 343 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 HSPH1Q92598 858 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 LYSMD1Q96S90 227 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 DNAJC7Q99615 494 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 POLR1EQ9GZS1 481 aaKnown RBP15.19■□□□□ 0.02
CMTM3-212ENST00000566121 PCDHGC4Q9Y5F7 938 aa15.19■□□□□ 0.02
CMTM3-212ENST00000566121 LRP4O75096 1905 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 ATXN7O15265 892 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 CPP00450 1065 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 MPOP05164 745 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 PCCBP05166 539 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 CELA2BP08218 269 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 ITGA2BP08514 1039 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 MX2P20592 715 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 PDX1P52945 283 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 TRIM14Q14142 442 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 SPIDRQ14159 915 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 DPYSL3Q14195 570 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 HLTFQ14527 1009 aaKnown RBP eCLIP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 TCEAL1Q15170 157 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 IFI16Q16666 785 aaKnown RBP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 SKOR2Q2VWA4 1001 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 ARMC12Q5T9G4 340 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 USP45Q70EL2 814 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 GPR155Q7Z3F1 870 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 ZNF438Q7Z4V0 828 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 NRSN1Q8IZ57 195 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 PCDH19Q8TAB3 1148 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 ZNF564Q8TBZ8 553 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 ATXN7L3BQ96GX2 97 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 TMEM74Q96NL1 305 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 DCBLD2Q96PD2 775 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 FRMD8Q9BZ67 464 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 FGF22Q9HCT0 170 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 PHPT1Q9NRX4 125 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-212ENST00000566121 SLC17A4Q9Y2C5 497 aa15.18■□□□□ 0.02
CMTM3-212ENST00000566121 ANKRD36A6QL64 1941 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 ARHGEF17Q96PE2 2063 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-212ENST00000566121 RGSL1A5PLK6 1076 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 CAPN8A6NHC0 703 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 ZW10O43264 779 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 NOBOXO60393 691 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 CEACAM5P06731 702 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 IVLP07476 585 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 CCNB1P14635 433 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 CASP14P31944 242 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 ARHGAP25P42331 645 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 ZFP36L1Q07352 338 aaKnown RBP15.17■□□□□ 0.02
CMTM3-212ENST00000566121 TRAF2Q12933 501 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 KRT81Q14533 505 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 ACOX1Q15067 660 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 ANKRD20A8PQ5CZ79 823 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 BROXQ5VW32 411 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 ADAMTSL4Q6UY14 1074 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 KYQ8NBH2 561 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 OR8K1Q8NGG5 319 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 KIAA1524Q8TCG1 905 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 NUS1Q96E22 293 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 PDXPQ96GD0 296 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 BBC3Q96PG8 261 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-212ENST00000566121 GFM1Q96RP9 751 aaKnown RBP15.17■□□□□ 0.02
CMTM3-212ENST00000566121 LGMNQ99538 433 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 LGR4Q9BXB1 951 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 LRRN3Q9H3W5 708 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 SATB2Q9UPW6 733 aa15.17■□□□□ 0.02
CMTM3-212ENST00000566121 RAI2Q9Y5P3 530 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms