RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PTPRRQ15256 657 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 CNGA3Q16281 694 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 ZNF569Q5MCW4 686 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 CBARPQ8N350 705 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 EID2Q8N6I1 236 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 SPATA22Q8NHS9 363 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 SLC35B2Q8TB61 432 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 SMIM14Q96QK8 99 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 APOOQ9BUR5 198 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 USP29Q9HBJ7 922 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 PCDH9Q9HC56 1237 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 TRHDEQ9UKU6 1024 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 RPL26L1Q9UNX3 145 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 APOBEC2Q9Y235 224 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 ARHGEF17Q96PE2 2063 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 NPIPB15A6NHN6 443 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 H3BM21 787 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 ENC1O14682 589 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 KCNN4O15554 427 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 SDC3O75056 442 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 MT-CYBP00156 380 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 ALPIP09923 528 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 NME1P15531 152 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 GM2AP17900 193 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 NFKB1P19838 968 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 LHCGRP22888 699 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 HNF1BP35680 557 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 EIF2B5Q13144 721 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 SLC14A2Q15849 920 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 ZNF542PQ5EBM4 170 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 TPRG1LQ5T0D9 272 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 DENND2CQ68D51 928 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 KDM7AQ6ZMT4 941 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 MACC1Q6ZN28 852 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 SLC25A45Q8N413 288 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 LPCAT1Q8NF37 534 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 BTN2A2Q8WVV5 523 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 COQ10AQ96MF6 247 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 FCRL5Q96RD9 977 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 FERMT1Q9BQL6 677 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 FTSJ1Q9UET6 329 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 DNPEPQ9ULA0 475 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 JRKLQ9Y4A0 524 aa13.84□□□□□ -0.19
HERPUD1-210ENST00000565966 ZFC3H1O60293 1989 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-210ENST00000565966 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ANKRD66B4E2M5 251 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 F5H423 210 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 KIF5CO60282 957 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 LDOC1O95751 146 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 PCCBP05166 539 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ZNF30P17039 623 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 JUNDP17535 347 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 HTR1BP28222 390 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 CXCR5P32302 372 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 TRIM23P36406 574 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 FOXC1Q12948 553 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 SIX1Q15475 284 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 QPCTQ16769 361 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 HS1BP3Q53T59 392 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ANKRD20A2Q5SQ80 823 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ANKRD20A1Q5TYW2 823 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ANKRD20A3Q5VUR7 823 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 CRTC1Q6UUV9 634 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 TSPAN33Q86UF1 283 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 PLA2G15Q8NCC3 412 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ATL2Q8NHH9 583 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ATG4AQ8WYN0 398 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 NUS1Q96E22 293 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 OXNAD1Q96HP4 312 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 TRIB3Q96RU7 358 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 LYSMD1Q96S90 227 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 MLPHQ9BV36 600 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ADGRE3Q9BY15 652 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 UCKL1Q9NWZ5 548 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 UBP1Q9NZI7 540 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 FAM153AQ9UHL3 310 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 RSPH14Q9UHP6 348 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 KLF15Q9UIH9 416 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 ANGPTL2Q9UKU9 493 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 PLXNB3Q9ULL4 1909 aa13.83□□□□□ -0.2
HERPUD1-210ENST00000565966 MYLKQ15746 1914 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 ASXL3Q9C0F0 2248 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 A0A0U1RQS6 177 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 GOLGA8CPA6NN73 597 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 SCAMP1O15126 338 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 LIASO43766 372 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 CEP104O60308 925 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 PMPCBO75439 489 aa13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 ZNF189O75820 626 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 STK10O94804 968 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 ATP1A1P05023 1023 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 HOXC4P09017 264 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-210ENST00000565966 ATXN1LP0C7T5 689 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms