RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 KCNE4Q8WWG9 221 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 SCG3Q8WXD2 468 aaKnown RBP23.77■■□□□ 1.4
RAB40C-209ENST00000565511 SUDS3Q9H7L9 328 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-209ENST00000565511 THSD1Q9NS62 852 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 IP6K2Q9UHH9 426 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 PCDHGA8Q9Y5G5 932 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 PRSS38A1L453 326 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 CTPS1P17812 591 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 GJC1P36383 396 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 HSPA9P38646 679 aaKnown RBP23.76■■□□□ 1.39
RAB40C-209ENST00000565511 MMP13P45452 471 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 OGFOD3Q6PK18 319 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 GPR155Q7Z3F1 870 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 TAF8Q7Z7C8 310 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 NRROSQ86YC3 692 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 ATL2Q8NHH9 583 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 DTD2Q96FN9 168 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 NT5MQ9NPB1 228 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 ATXN7L1Q9ULK2 861 aaPredicted RBP23.76■■□□□ 1.39
RAB40C-209ENST00000565511 ST14Q9Y5Y6 855 aa23.76■■□□□ 1.39
RAB40C-209ENST00000565511 BZW2Q9Y6E2 419 aaKnown RBP23.76■■□□□ 1.39
RAB40C-209ENST00000565511 CCDC187A0A096LP49 1063 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 B4DGG1 531 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 KLK10O43240 276 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 PGLSO95336 258 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 PDHA1P08559 390 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 HGFP14210 728 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 TAS2R40P59535 323 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 DPYSL3Q14195 570 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 KRT81Q14533 505 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 NCBP2-AS2Q69YL0 99 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 ALKBH5Q6P6C2 394 aaKnown RBP23.75■■□□□ 1.39
RAB40C-209ENST00000565511 TMPRSS9Q7Z410 1059 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 HEATR4Q86WZ0 1026 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 TEX26Q8N6G2 289 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 Q8N9G6 341 aaPredicted RBP23.75■■□□□ 1.39
RAB40C-209ENST00000565511 FAM46DQ8NEK8 389 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 WDR36Q8NI36 951 aaKnown RBP23.75■■□□□ 1.39
RAB40C-209ENST00000565511 PIH1D2Q8WWB5 315 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 SLC39A7Q92504 469 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 GRAMD1AQ96CP6 724 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 MCCC1Q96RQ3 725 aaPredicted RBP23.75■■□□□ 1.39
RAB40C-209ENST00000565511 PACSIN1Q9BY11 444 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 IFNKQ9P0W0 207 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 MOSPD1Q9UJG1 213 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 SSUH2Q9Y2M2 353 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 RNF215Q9Y6U7 377 aa23.75■■□□□ 1.39
RAB40C-209ENST00000565511 HELZ2Q9BYK8 2649 aaKnown RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 TNFRSF10CO14798 259 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 TNFSF15O95150 251 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 MYCLP1P12525 358 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 RBMS1P29558 406 aaKnown RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 HLTFQ14527 1009 aaKnown RBP eCLIP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 NFKBIBQ15653 356 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 CCDC122Q5T0U0 273 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 FAM182AQ5T1J6 154 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 CERCAMQ5T4B2 595 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 MARC1Q5VT66 337 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 SPECC1LQ69YQ0 1117 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 Q6ZVL8 140 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 CLEC14AQ86T13 490 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 CCNJLQ8IV13 435 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 WDR48Q8TAF3 677 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 ZNF564Q8TBZ8 553 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 LIN37Q96GY3 246 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 GFM1Q96RP9 751 aaKnown RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 TEX101Q9BY14 249 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 FRMD8Q9BZ67 464 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 LRRN3Q9H3W5 708 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 EPB41L5Q9HCM4 733 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 SPATS2LQ9NUQ6 558 aaKnown RBP23.74■■□□□ 1.39
RAB40C-209ENST00000565511 PHTF1Q9UMS5 762 aa23.74■■□□□ 1.39
RAB40C-209ENST00000565511 ZFC3H1O60293 1989 aaKnown RBP23.73■■□□□ 1.39
RAB40C-209ENST00000565511 AGRPO00253 132 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 FZD6O60353 706 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 SOD1P00441 154 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 CEACAM5P06731 702 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 CASP14P31944 242 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 SERPINB6P35237 376 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 SSR1P43307 286 aaKnown RBP23.73■■□□□ 1.39
RAB40C-209ENST00000565511 MAZP56270 477 aaKnown RBP23.73■■□□□ 1.39
RAB40C-209ENST00000565511 GALNT2Q10471 571 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 ARHGAP40Q5TG30 622 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.73■■□□□ 1.39
RAB40C-209ENST00000565511 SEMA3CQ99985 751 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 CARS2Q9HA77 564 aaKnown RBP23.73■■□□□ 1.39
RAB40C-209ENST00000565511 CD84Q9UIB8 345 aa23.73■■□□□ 1.39
RAB40C-209ENST00000565511 KELP23276 732 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 GARSP41250 739 aaKnown RBP23.72■■□□□ 1.39
RAB40C-209ENST00000565511 POLD2P49005 469 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 CDK3Q00526 305 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 DSC2Q02487 901 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 C14orf28Q4W4Y0 310 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 SPRED1Q7Z699 444 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 TECPR1Q7Z6L1 1165 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 MAML1Q92585 1016 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 SCRN2Q96FV2 425 aa23.72■■□□□ 1.39
RAB40C-209ENST00000565511 RCOR3Q9P2K3 495 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-209ENST00000565511 LUC7L2Q9Y383 392 aaKnown RBP23.72■■□□□ 1.39
RAB40C-209ENST00000565511 PPIL1Q9Y3C6 166 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms