RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 WDR92Q96MX6 357 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 CEP41Q9BYV8 373 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 CLPBQ9H078 707 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 DTLQ9NZJ0 730 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 SEPT10Q9P0V9 454 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 GULP1Q9UBP9 304 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 CLCA2Q9UQC9 943 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 AK5Q9Y6K8 562 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 U3KQA8 63 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 RP1P56715 2156 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 NPIPB15A6NHN6 443 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 ZNF487B1APH4 448 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 APOL1O14791 398 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 HEXIM1O94992 359 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 RASGRP1O95267 797 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 MT-CO3P00414 261 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 TNFP01375 233 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 JCHAINP01591 159 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CDK4P11802 303 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CCNB1P14635 433 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 GM2AP17900 193 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 MX2P20592 715 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 LHCGRP22888 699 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CCNCP24863 283 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 ETV3P41162 512 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 PEX5P50542 639 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 DUSP3P51452 185 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 SRP54P61011 504 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CCZ1BP86790 482 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 AP1B1Q10567 949 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 KIF5AQ12840 1032 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 ILKQ13418 452 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CAMK2BQ13554 666 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 HSD11B1LQ7Z5J1 315 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 VSIG1Q86XK7 387 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 PROSER1Q86XN7 944 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 LRRC49Q8IUZ0 686 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CCDC13Q8IYE1 715 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 TEX26Q8N6G2 289 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 MAPK15Q8TD08 544 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 OR1E3Q8WZA6 343 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 MAML1Q92585 1016 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 FUBP1Q96AE4 644 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 PDXPQ96GD0 296 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 LGMNQ99538 433 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 ABCG4Q9H172 646 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CD84Q9UIB8 345 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CHKBQ9Y259 395 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 RAXQ9Y2V3 346 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 CSNK1G3Q9Y6M4 447 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 LAMA5O15230 3695 aa13.65□□□□□ -0.22
VPS9D1-204ENST00000565023 HELZ2Q9BYK8 2649 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 A0A0U1RQJ8 604 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 A0A1W2PQ67 120 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 CFAP69A5D8W1 941 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 TMEM202A6NGA9 273 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 C3orf70A6NLC5 250 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 TOR1BO14657 336 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 YY2O15391 372 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 PSTPIP1O43586 416 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 NFKBIAP25963 317 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 BLKP51451 505 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 HK3P52790 923 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 E2F1Q01094 437 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 NIPAL4Q0D2K0 466 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 AGERQ15109 404 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 NR0B2Q15466 257 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 RALGPS1Q5JS13 557 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 KAZNQ674X7 775 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 RAET1GQ6H3X3 334 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 C19orf48Q6RUI8 117 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 RFLNAQ6ZTI6 216 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 Q6ZVL8 140 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 USP45Q70EL2 814 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 DAAM2Q86T65 1068 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 SLC35F3Q8IY50 421 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 NDUFAF2Q8N183 169 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 PLD5Q8N7P1 536 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 LPCAT1Q8NF37 534 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 ATL2Q8NHH9 583 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 COQ10AQ96MF6 247 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 LGR4Q9BXB1 951 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 WDR26Q9H7D7 661 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 CYP4F12Q9HCS2 524 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 FGF22Q9HCT0 170 aa13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 DDX56Q9NY93 547 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-204ENST00000565023 FREM2Q5SZK8 3169 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 LMO7DNF2Z398 122 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 OPA1O60313 960 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 KRT10P13645 584 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 CD86P42081 329 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 NAP1L1P55209 391 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 KIAA1024LP59773 190 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms