RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 RBBP5Q15291 538 aaKnown RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 OASLQ15646 514 aaKnown RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 ADCK5Q3MIX3 580 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 FAM72AQ5TYM5 149 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 ZNF772Q68DY9 489 aaPredicted RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 NAPEPLDQ6IQ20 393 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 FAM72DQ6L9T8 149 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 JMJD6Q6NYC1 403 aaPredicted RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 FAM72BQ86X60 149 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 CPXM2Q8N436 756 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 USP38Q8NB14 1042 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 FIG4Q92562 907 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 TANKQ92844 425 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 C3orf30Q96M34 536 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 NOD2Q9HC29 1040 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 PTPRHQ9HD43 1115 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 TLR8Q9NR97 1041 aaKnown RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 RRP7BPQ9NSQ0 103 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 TCF19Q9Y242 345 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 ADAM18Q9Y3Q7 739 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 DAAM1Q9Y4D1 1078 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 PCDHGB5Q9Y5G0 923 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 CEP152O94986 1710 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 PTPN23Q9H3S7 1636 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 LMTK2Q8IWU2 1503 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 DAPK1P53355 1430 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 FGD6Q6ZV73 1430 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 PIK3R4Q99570 1358 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 STX16-NPEPL1H3BU86 382 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 P2RY10O00398 339 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 STX16O14662 325 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 XPNPEP2O43895 674 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 FGF17O60258 216 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 ATP2C2O75185 946 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 ATP1A1P05023 1023 aaKnown RBP4.3□□□□□ -1.72
CHD9-212ENST00000564641 WEE2P0C1S8 567 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 LINC00271P0C7V0 271 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 SRD5A1P18405 259 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 STX2P32856 288 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 CXCR3P49682 368 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 NR1H2P55055 460 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 ZBTB17Q13105 803 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 ARHGEF6Q15052 776 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 PDCD2Q16342 344 aaPredicted RBP4.3□□□□□ -1.72
CHD9-212ENST00000564641 FBXO43Q4G163 708 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 CREB3L4Q8TEY5 395 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 AFG1LQ8WV93 481 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 RAB40AQ8WXH6 277 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 CNOT9Q92600 299 aaKnown RBP4.3□□□□□ -1.72
CHD9-212ENST00000564641 EVI5LQ96CN4 794 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 FBXO17Q96EF6 278 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 PGLYRP2Q96PD5 576 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 CD180Q99467 661 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 HERPUD2Q9BSE4 406 aa4.3□□□□□ -1.72
CHD9-212ENST00000564641 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
CHD9-212ENST00000564641 TMEM94Q12767 1356 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 JCADQ9P266 1359 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 CGNL1Q0VF96 1302 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 DIP2AQ14689 1571 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 hCG_1642624A0A1W2PR95 340 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 CCDC189A1A4V9 331 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 ZIC3O60481 467 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 SERPINB2P05120 415 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 CETPP11597 493 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 VEGFAP15692 232 aaPredicted RBP4.29□□□□□ -1.72
CHD9-212ENST00000564641 KCNA5P22460 613 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 IL15P40933 162 aaPredicted RBP4.29□□□□□ -1.72
CHD9-212ENST00000564641 VEGFCP49767 419 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 CRIP2P52943 208 aaPredicted RBP4.29□□□□□ -1.72
CHD9-212ENST00000564641 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 RUNX2Q13950 521 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 NEDD9Q14511 834 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 ANKRD1Q15327 319 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 CES5AQ6NT32 575 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 CCNI2Q6ZMN8 369 aaPredicted RBP4.29□□□□□ -1.72
CHD9-212ENST00000564641 KRBA2Q6ZNG9 492 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 TBC1D26Q86UD7 250 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 LURAP1LQ8IV03 231 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 ZNF441Q8N8Z8 693 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 SPPL3Q8TCT6 385 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 SNAPC3Q92966 411 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 USP13Q92995 863 aaPredicted RBP4.29□□□□□ -1.72
CHD9-212ENST00000564641 MAF1Q9H063 256 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 SLC9A2Q9UBY0 812 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 DNAJC16Q9Y2G8 782 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 ADGRB3O60242 1522 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 ANKRD50Q9ULJ7 1429 aa4.29□□□□□ -1.72
CHD9-212ENST00000564641 PIK3C2BO00750 1634 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 PLEKHG1Q9ULL1 1385 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 ADGRF5Q8IZF2 1346 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 A0A0G2JPF8 293 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 A0A1W2PS18 150 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 CBY3A6NI87 242 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 HNRNPCL3B7ZW38 293 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 HNRNPCL1O60812 293 aaKnown RBP4.28□□□□□ -1.72
CHD9-212ENST00000564641 RGS11O94810 467 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 RNF224P0DH78 156 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 HNRNPCL4P0DMR1 293 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 HNRNPH1P31943 449 aaKnown RBP4.28□□□□□ -1.72
CHD9-212ENST00000564641 CDKN1AP38936 164 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms