RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 HEXIM1O94992 359 aaKnown RBP23.9■■□□□ 1.42
NME3-206ENST00000564252 CPP00450 1065 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 PNLIPP16233 465 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 VIPR1P32241 457 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 CFHR1Q03591 330 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 TRAF2Q12933 501 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 HLTFQ14527 1009 aaKnown RBP eCLIP23.9■■□□□ 1.42
NME3-206ENST00000564252 IQCB1Q15051 598 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 C14orf28Q4W4Y0 310 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 HGSNATQ68CP4 663 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 CBARPQ8N350 705 aaPredicted RBP23.9■■□□□ 1.42
NME3-206ENST00000564252 Q8N9G6 341 aaPredicted RBP23.9■■□□□ 1.42
NME3-206ENST00000564252 TMEM74Q96NL1 305 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 PCDHGA7Q9Y5G6 932 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 RNF215Q9Y6U7 377 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 SCN8AQ9UQD0 1980 aa23.89■■□□□ 1.42
NME3-206ENST00000564252 ARHGEF17Q96PE2 2063 aaPredicted RBP23.89■■□□□ 1.41
NME3-206ENST00000564252 B4DGG1 531 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 K7ENP7 123 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 MYCLP1P12525 358 aaPredicted RBP23.89■■□□□ 1.41
NME3-206ENST00000564252 SLC25A11Q02978 314 aaKnown RBP23.89■■□□□ 1.41
NME3-206ENST00000564252 PIGHQ14442 188 aaPredicted RBP23.89■■□□□ 1.41
NME3-206ENST00000564252 SPECC1LQ69YQ0 1117 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 INO80CQ6PI98 192 aaPredicted RBP23.89■■□□□ 1.41
NME3-206ENST00000564252 SPRED1Q7Z699 444 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 ATPAF2Q8N5M1 289 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 NIPA2Q8N8Q9 360 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 TEKT4Q8WW24 435 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 TTC9Q92623 222 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 DTD2Q96FN9 168 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 TEX101Q9BY14 249 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 DPEP2Q9H4A9 486 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 PCDH18Q9HCL0 1135 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 MOSPD1Q9UJG1 213 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 PHTF1Q9UMS5 762 aa23.89■■□□□ 1.41
NME3-206ENST00000564252 PDE2AO00408 941 aaPredicted RBP23.88■■□□□ 1.41
NME3-206ENST00000564252 HGFP14210 728 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 LHCGRP22888 699 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 SLC5A2P31639 672 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 MAXP61244 160 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 TSR1Q2NL82 804 aaKnown RBP23.88■■□□□ 1.41
NME3-206ENST00000564252 TDRD12Q587J7 1177 aaKnown RBP23.88■■□□□ 1.41
NME3-206ENST00000564252 HSD11B1LQ7Z5J1 315 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 HEATR4Q86WZ0 1026 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 BBS5Q8N3I7 341 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 GPBAR1Q8TDU6 330 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 BTBD6Q96KE9 485 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 FUCA2Q9BTY2 467 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 THAP2Q9H0W7 228 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 PHPT1Q9NRX4 125 aaPredicted RBP23.88■■□□□ 1.41
NME3-206ENST00000564252 KCTD5Q9NXV2 234 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 LRIT1Q9P2V4 623 aa23.88■■□□□ 1.41
NME3-206ENST00000564252 ATXN7L1Q9ULK2 861 aaPredicted RBP23.88■■□□□ 1.41
NME3-206ENST00000564252 NPIPB15A6NHN6 443 aaPredicted RBP23.87■■□□□ 1.41
NME3-206ENST00000564252 SERPINC1P01008 464 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 FUCA1P04066 466 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 CEACAM5P06731 702 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 SERPINB6P35237 376 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 ETV3P41162 512 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 MMP13P45452 471 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 CDH6P55285 790 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 ZFP36L1Q07352 338 aaKnown RBP23.87■■□□□ 1.41
NME3-206ENST00000564252 RALGPS1Q5JS13 557 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 DENND2CQ68D51 928 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 CAVIN1Q6NZI2 390 aaKnown RBP23.87■■□□□ 1.41
NME3-206ENST00000564252 NRROSQ86YC3 692 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 MCCC1Q96RQ3 725 aaPredicted RBP23.87■■□□□ 1.41
NME3-206ENST00000564252 FRMD8Q9BZ67 464 aaPredicted RBP23.87■■□□□ 1.41
NME3-206ENST00000564252 CARS2Q9HA77 564 aaKnown RBP23.87■■□□□ 1.41
NME3-206ENST00000564252 ACSL6Q9UKU0 697 aa23.87■■□□□ 1.41
NME3-206ENST00000564252 AHCTF1Q8WYP5 2266 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 PSMD11O00231 422 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 NUDT21O43809 227 aaKnown RBP23.86■■□□□ 1.41
NME3-206ENST00000564252 PGLSO95336 258 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 CYP2A6P11509 494 aaPredicted RBP23.86■■□□□ 1.41
NME3-206ENST00000564252 CCNB1P14635 433 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 NFKBIAP25963 317 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 PTPRRQ15256 657 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 ZSCAN23Q3MJ62 389 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 MARC1Q5VT66 337 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 CCDC81Q6ZN84 652 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 TMPRSS9Q7Z410 1059 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 TSPAN33Q86UF1 283 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 C17orf82Q86X59 251 aaPredicted RBP23.86■■□□□ 1.41
NME3-206ENST00000564252 JAMLQ86YT9 394 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 KIAA1524Q8TCG1 905 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 NSMCE1Q8WV22 266 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 SYN2Q92777 582 aaPredicted RBP23.86■■□□□ 1.41
NME3-206ENST00000564252 SCRN2Q96FV2 425 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 SPATS2LQ9NUQ6 558 aaKnown RBP23.86■■□□□ 1.41
NME3-206ENST00000564252 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.86■■□□□ 1.41
NME3-206ENST00000564252 IP6K2Q9UHH9 426 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 ANAPC7Q9UJX3 599 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 PPIL1Q9Y3C6 166 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 LOXL2Q9Y4K0 774 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 BZW2Q9Y6E2 419 aaKnown RBP23.86■■□□□ 1.41
NME3-206ENST00000564252 PIEZO2Q9H5I5 2752 aa23.86■■□□□ 1.41
NME3-206ENST00000564252 A0A1W2PQJ5 194 aa23.85■■□□□ 1.41
NME3-206ENST00000564252 PLA2G2AP14555 144 aa23.85■■□□□ 1.41
NME3-206ENST00000564252 IL4RP24394 825 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms