RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 MYO1FO00160 1098 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 FZD6O60353 706 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 PGLSO95336 258 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 ITGA2BP08514 1039 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 CYP2A6P11509 494 aaPredicted RBP17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 GLB1P16278 677 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 HNRNPH3P31942 346 aaKnown RBP17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 CCKBRP32239 447 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 MMP13P45452 471 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 TRAF2Q12933 501 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 PAFAH1B3Q15102 231 aaKnown RBP17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 CERCAMQ5T4B2 595 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 BROXQ5VW32 411 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 ALG1LQ6GMV1 187 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 PAF1Q8N7H5 531 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 NUS1Q96E22 293 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 CCDC97Q96F63 343 aaPredicted RBP17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 DTD2Q96FN9 168 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 BTBD6Q96KE9 485 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 TMEM168Q9H0V1 697 aa17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 MRPL40Q9NQ50 206 aaKnown RBP17.23■□□□□ 0.35
VPS9D1-203ENST00000563798 PRSS38A1L453 326 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 A8MX80 341 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 GYPCP04921 128 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 LHCGRP22888 699 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 CES1P23141 567 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 TMPRSS3P57727 454 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 CCL7P80098 99 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 DPTQ07507 201 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 GALNT2Q10471 571 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 HADHQ16836 314 aaKnown RBP17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 C14orf28Q4W4Y0 310 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 TECPR1Q7Z6L1 1165 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 TAF8Q7Z7C8 310 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 NLRP8Q86W28 1048 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 C17orf82Q86X59 251 aaPredicted RBP17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 FAM46DQ8NEK8 389 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 GPBAR1Q8TDU6 330 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 PIH1D2Q8WWB5 315 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 MAML1Q92585 1016 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 TSGA13Q96PP4 275 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 GFM1Q96RP9 751 aaKnown RBP17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 FRMD8Q9BZ67 464 aaPredicted RBP17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 LRRN3Q9H3W5 708 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 PHPT1Q9NRX4 125 aaPredicted RBP17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 AMACRQ9UHK6 382 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 PCDHGA7Q9Y5G6 932 aa17.22■□□□□ 0.35
VPS9D1-203ENST00000563798 NPIPB15A6NHN6 443 aaPredicted RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 EIF4E1BA6NMX2 242 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 NUDT21O43809 227 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 RPLP0P05388 317 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 CEACAM5P06731 702 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 GARSP41250 739 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 MAXP61244 160 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 CXADRP78310 365 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 ZFP36L1Q07352 338 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 KRT81Q14533 505 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 CCDC122Q5T0U0 273 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 ARMC12Q5T9G4 340 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 HSD11B1LQ7Z5J1 315 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 B3GNT8Q7Z7M8 397 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 RAVER1Q8IY67 606 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 PDCD6IPQ8WUM4 868 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 CPLX3Q8WVH0 158 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 SLC39A7Q92504 469 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 WBP1Q96G27 269 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 NAF1Q96HR8 494 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 TMEM74Q96NL1 305 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 ZNF670Q9BS34 389 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 CYP4F12Q9HCS2 524 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 TRNAU1APQ9NX07 287 aaKnown RBP17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 LCMT1Q9UIC8 334 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 ACSL6Q9UKU0 697 aa17.21■□□□□ 0.35
VPS9D1-203ENST00000563798 SHROOM3Q8TF72 1996 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 PMS2P1A4D2B8 440 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 PLD2O14939 933 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 MATN3O15232 486 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 KLK10O43240 276 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 PROSCO94903 275 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 TNFSF15O95150 251 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 FUCA1P04066 466 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 CD48P09326 243 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 CCNB1P14635 433 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 ETV3P41162 512 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 INHBCP55103 352 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 CDK3Q00526 305 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 MMRN1Q13201 1228 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 DPYSL3Q14195 570 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 PDK2Q15119 407 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 NFKBIBQ15653 356 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 NCBP2-AS2Q69YL0 99 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 SPECC1LQ69YQ0 1117 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 PCSK4Q6UW60 755 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 Q6ZVL8 140 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 USP45Q70EL2 814 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 SPRED1Q7Z699 444 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 HEATR4Q86WZ0 1026 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 NRROSQ86YC3 692 aa17.2■□□□□ 0.34
VPS9D1-203ENST00000563798 CCNJLQ8IV13 435 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms