RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FAM90A24PP0C7X0 464 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 IRF1P10914 325 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 PSMA4P25789 261 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 RFX5P48382 616 aaPredicted RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 PGGT1BP53609 377 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 F2RL1P55085 397 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 NANOS2P60321 138 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ZBED6P86452 979 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ROR2Q01974 943 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 CALD1Q05682 793 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ST3GAL1Q11201 340 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 TRAF1Q13077 416 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 PRPF4BQ13523 1007 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 CAPSQ13938 189 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 HSPB2Q16082 182 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 GSTA3Q16772 222 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 HIST2H2ACQ16777 129 aaPredicted RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 DPCR1Q3MIW9 517 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ALDH1L2Q3SY69 923 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 DNTTIP2Q5QJE6 756 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 OTUD1Q5VV17 481 aaPredicted RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 KIAA0930Q6ICG6 404 aaPredicted RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 Q6ZSV7 163 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 BRINP3Q76B58 766 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ZNF367Q7RTV3 350 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 SFTPA2Q8IWL1 248 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 DHX40Q8IX18 779 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 SCML4Q8N228 414 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 KCTD6Q8NC69 237 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 OTULINQ96BN8 352 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 C1orf74Q96LT6 269 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ZMAT2Q96NC0 199 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 GFM1Q96RP9 751 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 H2AFJQ9BTM1 129 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 TXLNGYQ9BZA5 131 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 KLHL4Q9C0H6 718 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 PLEKHA4Q9H4M7 779 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC6A13Q9NSD5 602 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 WWOXQ9NZC7 414 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 IL36RNQ9UBH0 155 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 CNOT8Q9UFF9 292 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 GIMAP2Q9UG22 337 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 SLCO3A1Q9UIG8 710 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 SQORQ9Y6N5 450 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 A3GALT2U3KPV4 340 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 NPIPB11E5RHQ5 1161 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 VWA5AO00534 786 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 TNFRSF13BO14836 293 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 BCAT2O15382 392 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ADAM20O43506 726 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 RGS14O43566 566 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 DIAPH2O60879 1101 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 NKX2-2O95096 273 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 MT-CYBP00156 380 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 RB1P06400 928 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ITGAXP20702 1163 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 AGAP20933 346 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 CHATP28329 748 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 THPOP40225 353 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 PIP4K2AP48426 406 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ENTPD1P49961 510 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 MRPL12P52815 198 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 GALCP54803 685 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 HDAC4P56524 1084 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 GRIK3Q13003 919 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 GPS2Q13227 327 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 CRYMQ14894 314 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 PLCB4Q15147 1175 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 SOWAHAQ2M3V2 549 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ZSCAN23Q3MJ62 389 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ESCO2Q56NI9 601 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 C1QTNF12Q5T7M4 302 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 DAB2IPQ5VWQ8 1189 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 TMEM154Q6P9G4 183 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 CPLX2Q6PUV4 134 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 Q6ZTK2 550 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 MON1BQ7L1V2 547 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 RPAP2Q8IXW5 612 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 PELI3Q8N2H9 469 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 GJC3Q8NFK1 279 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 NEK9Q8TD19 979 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 GPT2Q8TD30 523 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 PSPC1Q8WXF1 523 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 MMABQ96EY8 250 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 SAT2Q96F10 170 aaPredicted RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ELMOD3Q96FG2 381 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ZC3HAV1LQ96H79 300 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 CNDP2Q96KP4 475 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 APOLD1Q96LR9 279 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ABHD1Q96SE0 405 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 SIN3AQ96ST3 1273 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 MXRA8Q9BRK3 442 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 TKTL2Q9H0I9 626 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 NDST4Q9H3R1 872 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 CLK4Q9HAZ1 481 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ZCCHC17Q9NP64 241 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 PLK2Q9NYY3 685 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms